ggKbase home page

L3_083_059G1_scaffold_469_11

Organism: L3_083_059G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Location: 12428..13195

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XZB2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 255.0
  • Bit_score: 488
  • Evalue 2.30e-135
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 255.0
  • Bit_score: 488
  • Evalue 3.20e-135
sigF; RNA polymerase sigma-F factor similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 254.0
  • Bit_score: 415
  • Evalue 7.00e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium bartlettii CAG:1329 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 768
ATGGGGATAACTGCTAAAAAAGAAGAAAAGAAGCATTTACTTAGCCATGAAGAAACTCTAGATTTGATACAAAAAGTACAAAATGGAGATGAAGAAGCTAAGGCTTTGCTTATATCTAGCAACCTCGGGTTAGTCAGAAGTGTAATAGGAAAATTTTCAAATATAGGATACGAAAGAGATGATTTATTTCAATTAGGTTCTATAGGTTTAATAAAAGCCATATATAAATTTGATCCTAGCTATAATGTAAAATTCTCTACATATGCTGTTCCTATGATATTAGGCGAAATAAAAAGATATTTAAGAGATGACGGAATGGTCAAAGTATCTCGTTCTTTAAAACAGCTTGCAATTAAAGTTAAGATGCAAGGAGAAATGCTAAGTAAAAAACTAGGTAGAGACCCTACAATAGAAGAATTGGCAGAAGCAATAGGGGTAGAAAAAGAAGATGTAGTAATGGCAATAGAGTCTAATTTTTCTGTTGAATATTTACAAGGAGTTATTCATGAAGAAGAGGGCTCTCCAATATGCCTTATCGACAAAATATCTCAAAAAGGGGAGGCAGAAGAAGATAAGGTGGTAGATAATATACTACTTAAGGAAGTACTAGGAAAATTAGATAAAAGAGAGCGACAAATTATTATGCTTAGATATTTTGAAGATAAAACACAAAGTGAGATAGGAGAATTATTAAATATATCTCAGGTTCAAGTATCTAGAATAGAGAAAAAAGTTTTACACAAATTAAAGTCATATATAGAAATGTAG
PROTEIN sequence
Length: 256
MGITAKKEEKKHLLSHEETLDLIQKVQNGDEEAKALLISSNLGLVRSVIGKFSNIGYERDDLFQLGSIGLIKAIYKFDPSYNVKFSTYAVPMILGEIKRYLRDDGMVKVSRSLKQLAIKVKMQGEMLSKKLGRDPTIEELAEAIGVEKEDVVMAIESNFSVEYLQGVIHEEEGSPICLIDKISQKGEAEEDKVVDNILLKEVLGKLDKRERQIIMLRYFEDKTQSEIGELLNISQVQVSRIEKKVLHKLKSYIEM*