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L3_098_000M1_public_UNK

In projects: L3_098_000M1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 90.42 Longest contig: 314.05 Kbp Bin length: 99.59 Mbp GC content: 45.63 %
Contigs count: 19418 Features count: 106672 rRNAs count: 11 tRNAs count: 1400

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Displaying items 301-350 of 19418 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_098_000M1_scaffold_12350
Species: Oscillibacter sp. KLE 1745 (100%)
2 1480 bp 59.05 4.86 100.95
L3_098_000M1_scaffold_13436
Species: Blautia sp. CAG:257 (100%)
2 1376 bp 42.59 4.58 100.95
L3_098_000M1_scaffold_11297 4 1596 bp 41.48 3.29 100.94
L3_098_000M1_scaffold_9154
Species: [Ruminococcus] torques (50%)
4 1917 bp 46.22 3.13 100.94
L3_098_000M1_scaffold_2860
Order: Clostridiales (80%)
10 5775 bp 55.26 5.79 100.94
L3_098_000M1_scaffold_12169
Species: Faecalibacterium prausnitzii (50%)
2 1498 bp 62.02 5.41 100.94
L3_098_000M1_scaffold_4578
Species: Eubacterium sp. 3_1_31 (75%)
4 3573 bp 37.53 5.12 100.92
L3_098_000M1_scaffold_17739
Species: Firmicutes bacterium CAG:424 (100%)
2 1091 bp 48.85 4.40 100.92
L3_098_000M1_scaffold_9383
Species: Ruminococcaceae bacterium 585-1 (50%)
2 1873 bp 57.98 6.73 100.91
L3_098_000M1_scaffold_7792
Species: [Clostridium] leptum (83.33%)
6 2218 bp 48.60 5.82 100.90
L3_098_000M1_scaffold_6215
Species: Hungatella hathewayi (100%)
3 2700 bp 45.22 3.50 100.89
L3_098_000M1_scaffold_16940
Species: butyrate-producing bacterium SS3/4 (100%)
2 1133 bp 55.43 4.37 100.88
L3_098_000M1_scaffold_19145
Species: Eubacterium sp. 3_1_31 (100%)
2 1020 bp 35.20 3.53 100.88
L3_098_000M1_scaffold_7188
Species: Firmicutes bacterium CAG:424 (100%)
2 2382 bp 36.73 4.28 100.88
L3_098_000M1_scaffold_17033
Species: Bacteroides sp. 4_1_36 (66.67%)
3 1817 bp 50.80 85.20 100.88
L3_098_000M1_scaffold_8991
Species: Bacteroides vulgatus (66.67%)
3 2504 bp 39.46 408.37 100.88
L3_098_000M1_scaffold_16776
Species: Bacteroides fragilis (100%)
2 1142 bp 55.52 609.46 100.88
L3_098_000M1_scaffold_16482 3 1157 bp 29.04 4.28 100.86
L3_098_000M1_scaffold_9462
Species: Roseburia sp. CAG:18 (100%)
3 1859 bp 44.81 3.71 100.86
L3_098_000M1_scaffold_3577
Species: butyrate-producing bacterium SS3/4 (66.67%)
3 4533 bp 47.63 5.36 100.86
L3_098_000M1_scaffold_18628
Species: Clostridium sp. CAG:58 (100%)
2 1047 bp 55.78 4.87 100.86
L3_098_000M1_scaffold_34532
Species: Bacteroides sp. 2_2_4 (50%)
2 1053 bp 42.74 481.34 100.86
L3_098_000M1_scaffold_18474
Species: Dorea formicigenerans CAG:28 (50%)
2 1053 bp 46.06 2.85 100.86
L3_098_000M1_scaffold_15864
Species: Dorea sp. CAG:317 (100%)
2 1193 bp 43.76 3.77 100.84
L3_098_000M1_scaffold_14055
Species: [Eubacterium] eligens (66.67%)
3 1324 bp 41.24 2.95 100.83
L3_098_000M1_scaffold_8501
Species: Blautia sp. CAG:257 (100%)
4 2047 bp 51.69 3.88 100.83
L3_098_000M1_scaffold_15637
Species: [Eubacterium] eligens (66.67%)
3 1208 bp 36.67 3.35 100.83
L3_098_000M1_scaffold_6033
Species: Eubacterium sp. 3_1_31 (100%)
3 2779 bp 38.43 4.43 100.83
L3_098_000M1_scaffold_9048
Species: Roseburia sp. CAG:18 (50%)
2 1934 bp 46.85 3.65 100.83
L3_098_000M1_scaffold_12606
Species: Dorea sp. 5-2 (100%)
2 1455 bp 39.52 3.30 100.83
L3_098_000M1_scaffold_13838 3 1342 bp 46.35 5.81 100.82
L3_098_000M1_scaffold_17597
Species: Eubacterium sp. 3_1_31 (100%)
2 1098 bp 42.71 4.78 100.82
L3_098_000M1_scaffold_5667
Species: Clostridium sp. CAG:81 (80%)
5 2928 bp 52.94 6.92 100.82
L3_098_000M1_scaffold_10392
Species: Coprococcus sp. HPP0074 (50%)
2 1717 bp 42.46 5.50 100.82
L3_098_000M1_scaffold_15337
Species: [Clostridium] clostridioforme (100%)
2 1229 bp 49.15 4.15 100.81
L3_098_000M1_scaffold_15211
Species: [Clostridium] bolteae (50%)
2 1238 bp 54.20 2.42 100.81
L3_098_000M1_scaffold_9452
Species: Eubacterium sp. 3_1_31 (50%)
2 1860 bp 37.04 5.65 100.81
L3_098_000M1_scaffold_11176
Species: Clostridium sp. CAG:58 (100%)
2 1613 bp 54.99 3.25 100.81
L3_098_000M1_scaffold_7345
Species: Bacteroides fragilis (50%)
2 3744 bp 54.91 466.47 100.80
L3_098_000M1_scaffold_13422
Species: Bacteroides ovatus (50%)
2 1378 bp 42.38 114.73 100.80
L3_098_000M1_scaffold_11013
Species: Firmicutes bacterium CAG:424 (66.67%)
3 1634 bp 44.37 3.30 100.80
L3_098_000M1_scaffold_16810
Species: [Clostridium] innocuum (50%)
2 1140 bp 32.81 4.47 100.79
L3_098_000M1_scaffold_14774
Species: Firmicutes bacterium ASF500 (100%)
2 1271 bp 62.39 5.07 100.79
L3_098_000M1_scaffold_14739
Species: [Clostridium] spiroforme (100%)
3 1274 bp 31.16 11.66 100.79
L3_098_000M1_scaffold_16622
Species: Dehalobacter sp. UNSWDHB (100%)
2 1149 bp 49.87 2.87 100.78
L3_098_000M1_scaffold_10803
Species: [Clostridium] citroniae (66.67%)
3 1661 bp 51.84 12.19 100.78
L3_098_000M1_scaffold_13086
Species: Firmicutes bacterium ASF500 (50%)
2 1411 bp 56.91 6.48 100.78
L3_098_000M1_scaffold_14563
Species: [Ruminococcus] gnavus (100%)
2 1286 bp 46.19 3.50 100.78
L3_098_000M1_scaffold_8454
Species: Firmicutes bacterium CAG:466 (50%)
2 2060 bp 45.34 3.50 100.78
L3_098_000M1_scaffold_13014
Species: Bacteroides vulgatus (100%)
2 1417 bp 43.97 2325.16 100.78
Displaying items 301-350 of 19418 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.