ggKbase home page

L3_098_047G1_scaffold_21908_3

Organism: L3_098_047G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(576..1172)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003631711 similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 198.0
  • Bit_score: 397
  • Evalue 7.10e-108
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EQM98866.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 182.0
  • Bit_score: 360
  • Evalue 7.90e-97
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 181.0
  • Bit_score: 302
  • Evalue 6.70e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus sp. 5_1_39BFAA → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 597
ATTACACCTGACAACAGAGGAGTAATATGGGGAAAGGAATTGAACGGTATGGCTACTGATGAAGAGCTTTATGGGCAATATCTGAGCGGTGACGAGACAGGACTTGAACTATTGATAAAAAATTACGGCGACCCATTGACCTTATACATCGATGGTTATCTGCATGATGTCCATGAAGCGGAGGACTTAATGATGGAAACCTTTTCCTGGCTGTTTACGAAAAAGCCCCGCATCCGTGATGGATGTTTTAAGGCTTATCTCTATAAAGCGGCGCGGCACATGGCTTTACGCCACAAAAGCAGACGGCGGATTATCTTCAGTCTTGACGACCTGACCAGAGAACCGGAGGTGCAGACACTGGTGGAGGAGGTCATCCGCACAAAGGAACGAAATCAGGTCCTGCATCTGTGCATGGACGAGTTAAATTCAGATTATCGGGAAGCTCTTTATCTGACCTATTTTGAGGGTATGAGCTATCAACAGGCTGCTAAGGTCATGGGAAAAAGTGTGAAGCAGATCACAAATATGGTGTACCGGGGAAAAGAGCGTTTACGCGGATTATTGCAACGGGAGGGTATTACAAATGTTGAAAAATGA
PROTEIN sequence
Length: 199
ITPDNRGVIWGKELNGMATDEELYGQYLSGDETGLELLIKNYGDPLTLYIDGYLHDVHEAEDLMMETFSWLFTKKPRIRDGCFKAYLYKAARHMALRHKSRRRIIFSLDDLTREPEVQTLVEEVIRTKERNQVLHLCMDELNSDYREALYLTYFEGMSYQQAAKVMGKSVKQITNMVYRGKERLRGLLQREGITNVEK*