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L3_101_000G1_scaffold_219_17

Organism: L3_101_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 18
Location: comp(19458..20069)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=53 Tax=Lactobacillus casei group RepID=RS4_LACC3 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 408
  • Evalue 3.10e-111
SSU ribosomal protein S4p similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 408
  • Evalue 8.90e-112
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 408
  • Evalue 4.40e-111

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Taxonomy

Lactobacillus paracasei → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 612
ATGTCTCGTTATACTGGTCCTCGCTGGAAGCAGAGCCGTCGTCTTGGCCTCTCCCTTTCCGGCACTGGTAAAGAATTAGCTCGTCGTCCTTATGCACCTGGTGATCATGGTGCCAACAACCGTCGTAAGATCTCTGAATACGGCCAACAATTGCGTGAAAAGCAAAAGTTACGTTGGATGTACGGCTTAAACGAACGCCAATTCCAGAACTTGTTCCTGCGCGCCGGCAAGATCAAAGAAGGTACCCATGGTGATAACTTCATGATCCTGCTCGAAACCCGTTTGGACAATCTGGTTTTCCGCTTGGGTCTGGCTTCCAGCCGTCCGCAAGCACGTCAACTTGTTAACCACGGTCACATCACCGTTGATGGCAAGCGCGTCGATATCCCTTCTTATGAAGTAGAGCCGGGCCAAGTGATCGCTCTTCGCGAACGTTCACAAAACCTTGCTATCGTCAATGAAGCCATCGAGAACACCGTTTCCCGTCCGGCCTACGTTACTTTTGACGACACTAAGAAGACCGGTTCCCTCGTTCGTTTACCAGAACGTGGCGAACTCGAACCAGAAGTTGACGAATCACTGGTTGTTGAATACTATAACCAGAAACTTTAA
PROTEIN sequence
Length: 204
MSRYTGPRWKQSRRLGLSLSGTGKELARRPYAPGDHGANNRRKISEYGQQLREKQKLRWMYGLNERQFQNLFLRAGKIKEGTHGDNFMILLETRLDNLVFRLGLASSRPQARQLVNHGHITVDGKRVDIPSYEVEPGQVIALRERSQNLAIVNEAIENTVSRPAYVTFDDTKKTGSLVRLPERGELEPEVDESLVVEYYNQKL*