ggKbase home page

L3_101_000G1_scaffold_126_21

Organism: L3_101_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 18
Location: comp(22427..25765)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 1112.0
  • Bit_score: 2135
  • Evalue 0.0
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 1113.0
  • Bit_score: 1557
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YW53_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 1112.0
  • Bit_score: 2135
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Coprococcus sp. HPP0048 → Coprococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3339
ATGGAAGCTCTTTTGGAGCCTTTGAGGGAACTGGCAGAGATTGAGGAGATTCAGAAAGAGAAGAAAGAGGAAGCAGGGCTGATCCAGATTACCGGATGTGTCGGCTCGCAGAAGACACATCTGATTTGTGCACTTGGCAGTGACTGTAAGTATAAGCTGATCGTGACTTCCGGGGAATCAAAGGCAAAGCAGATGTATGAGGAGTACCGTTTTTTAAAGGAAACAGTATATTTGTATCCGGCGAAAGACCTGCTGTTTTACCATGCAGATTTAAGAGGAAAACAGCTTGTCAGCAGTAGGATGGAGACGATTCAGGCACTTCTCCTTGGGGAAGGATGTACAGTCATCACGACATTTGATGCATTTATGGATTCTCTTCTGCCGATTGAGATGATCCGGGAGAGAGTATTCTCACTGAAGGTGGGGGATACCGTTGATTTTGAAAAAGTCCAGAAAGATCTGGCGCTTCTTGGATATGAAAGGGAAGTGCAGATTGAAGGACCGGGACAGTTTGCGGTGCGCGGAGGGATTTTAGATATCTACCCGCTCACGGAGGAAGTTCCGGTCCGCATGGAATTGTGGGATGATGAGATTGACTCGCTCCGCACGTTTGATGTGGAGAGCCAGCGGTCGATCGAGAACCTGGAGGAGATTACGATCTATCCGGCATCCGAATTTATGGATGAGAAGGCAAAGCGGGTCTCGTTCCTTGACTATTTTCCACGGAAAGAAACGATTTTGTTTCTGGAGGAGCCGGCACGGCTGATCGAGCAGGGGGAAGCAGTCGAAGCAGAATTTATCGAGAGTATGAAGAAGCGTGTGGAGACCGGCTGTGAAGTGTCGGACGAAGAAGTGAAGCTGTTTGCACCGAAGGAGATCGCATCGAAGATGAACCATTATCCGGGGATCGGGCTGTCGATACTGGAAAGTAAAAGTAACGCGTTTCATGTGAAAAAGAGTATTCATCTTCAGGTAAAGGGAGTGAATCCGTACAACAACAGTTTCGAGACGCTTACGAGAGATCTGGCGAGGCTGAAGCGCAGCGGTTACAGAGTGATACTTCTGTCAGGTTCCAGAACGAGAGCAAAGCGTCTGGCGGAAGATTTGAGAGATTACAGTCTGAGCAGCTTTTACAGTGAAGAGATGGACAGGGAAGTGCAGCCGGGGGAGATTCTGGTTGCTTATGGACATGTAGACGAGGGGTATGAGTATCCGCTGTTAAAGTTTATTGTAATCTCGGAGACGGATATTTTCGGGAAGAAAAAGAAGAAAAAGAAACGGAAAGTCTACGAAGGACAGAAGATCCAGAGTTTCTCGGATCTGAAGGTCGGAGACTATGTCGTTCATGAGAATCACGGACTTGGTATCTATCAGGGAATTGAGAAGATCGAAGTCGATAAGATTGCAAAAGATTACATGAAGATCTCCTATGCGGATGGGGGGAATCTTTACATTCTTGCCACACAGCTGGAATTGATCCAGAAATACGCAAGCTCCGATGCAAAAAGACCGAAGCTGAATAAGCTCGGAGGTCAGGAATGGGCGAAGACGAAGACGAGAGTCCGCGGGGCGGTCAAAGAGATCGCAAAAGAACTTGTGGAATTGTATGCGGCAAGACAGAAGGAAGAAGGATATGTCTACGGGGAAGACACCATCTGGCAGCGCGAGTTTGAGGAGATGTTCCCGTTTGAGGAGACCGATGATCAGTTAAATGCGATCGAGGCGACCAAAAAAGATATGGAGAGTAAGAAGATCATGGACCGCTTAATCTGCGGTGACGTCGGATATGGGAAGACGGAAGTGGCAGTCCGCGCTGCATTTAAGGCAGTGCAGGAAAGTAAGCAGGTCGTGTATCTTGTTCCGACGACGGTGCTTGCCCAGCAGCATTACAATACGTTTGTGCAGCGGATGAAGGATTTTCCGGTGAGGGTGGATCTGTTATGCAGATTCCGGACTCCGGCGCAGCAGAGAAAGACGATCGAGGATGTAAGAAAAGGTCTTGTGGATATTGTGATCGGAACGCACCGTGTACTTTCGGATGATCTGAAATTTAAGGATCTGGGACTTTTGATCATCGATGAGGAACAGAGGTTTGGGGTACAGCACAAAGAGAAGATCAAGCAGATGAAAGAAAATGTAGACGTGCTGACACTGACGGCAACACCGATTCCGAGAACACTTCACATGAGTCTGATCGGAATCCGCGATATGAGTGTGCTGGAAGAGCCTCCGATGGACCGGATGCCGATCCAGACGTATGTGATGGAGTACAATGACGAGATGGTGCGCGAGGCGATCGAGCGGGAACTTGCAAGGGACGGACAAGTGTATTATGTGTACAACCGGGTACAAGATATCGATGAAGTCGCAGACCGGATCCAGAAGCTTGTGCCGGAGGCAAATGTGGCATTCGCCCATGGACAGATGCGGGAGCATCAGCTGGAGAGGATCATGTACGATTTCATTAACGGAGAGATCGATGTGCTGATCTCGACGACGATCATTGAGACCGGTCTTGATATTTCCAATGCGAATACGATGATCATACATGATGCGGACCGGCTTGGACTCTCCCAGCTGTATCAGCTTCGCGGGCGCGTCGGGCGGTCGAACCGGATGGCATATGCATTTCTGCTCTACAAGCGGGATAAGCTGTTAAAAGAAGTGGCAGAAAAGAGATTGTCGGCGATCCGTGAGTTTACAGATCTCGGTTCTGGATTTAAGATTGCCATGAGAGATCTTGAGATCCGTGGAGCGGGCAATCTTCTCGGAGCGGAGCAGCACGGGCATATGGAGGCAGTCGGATACGATCTGTACTGTAAGATGTTAAATGAGGCAGTCAGACATCTGAAAGGAGAAGTGGAAGAAACACCATACACGACGACAGTTGACTTAAATGTCGATGCCTACATTCCGGCGTCCTACATCCCGAATGAATACCAGAAATTGGATATTTACAAGCGGATTGCGGGAATTGAGTCGGAGGAAGAGATGGATGATATGGTCGAAGAACTGATTGACCGTTTCGGAGATATTCCGAGAAAAGTCCAGAAGCTTCTGGCGATCGCGAATCTGAAAGCGATGGCGCACCGCCTATATATTACAGCGGTGGAGCAAAAGGGAGAAGCATATCAATTCACGATGTTTGAACATGCAAAGATCCGGACAGAGAGGATTCCCAAGCTTCTGGAACTGTACAAGGAGGAGTTGAACTTTAAGATGGAGACTCCGCCGTATTTCCTCTATCGGAAGAAGAACCGGAATCGCAGAGGCAAGGAGGAAGATCCGATCGAAGTTGTGAAAAAAGTGTTAATTGATATGAAAACATTGCTAGAATAA
PROTEIN sequence
Length: 1113
MEALLEPLRELAEIEEIQKEKKEEAGLIQITGCVGSQKTHLICALGSDCKYKLIVTSGESKAKQMYEEYRFLKETVYLYPAKDLLFYHADLRGKQLVSSRMETIQALLLGEGCTVITTFDAFMDSLLPIEMIRERVFSLKVGDTVDFEKVQKDLALLGYEREVQIEGPGQFAVRGGILDIYPLTEEVPVRMELWDDEIDSLRTFDVESQRSIENLEEITIYPASEFMDEKAKRVSFLDYFPRKETILFLEEPARLIEQGEAVEAEFIESMKKRVETGCEVSDEEVKLFAPKEIASKMNHYPGIGLSILESKSNAFHVKKSIHLQVKGVNPYNNSFETLTRDLARLKRSGYRVILLSGSRTRAKRLAEDLRDYSLSSFYSEEMDREVQPGEILVAYGHVDEGYEYPLLKFIVISETDIFGKKKKKKKRKVYEGQKIQSFSDLKVGDYVVHENHGLGIYQGIEKIEVDKIAKDYMKISYADGGNLYILATQLELIQKYASSDAKRPKLNKLGGQEWAKTKTRVRGAVKEIAKELVELYAARQKEEGYVYGEDTIWQREFEEMFPFEETDDQLNAIEATKKDMESKKIMDRLICGDVGYGKTEVAVRAAFKAVQESKQVVYLVPTTVLAQQHYNTFVQRMKDFPVRVDLLCRFRTPAQQRKTIEDVRKGLVDIVIGTHRVLSDDLKFKDLGLLIIDEEQRFGVQHKEKIKQMKENVDVLTLTATPIPRTLHMSLIGIRDMSVLEEPPMDRMPIQTYVMEYNDEMVREAIERELARDGQVYYVYNRVQDIDEVADRIQKLVPEANVAFAHGQMREHQLERIMYDFINGEIDVLISTTIIETGLDISNANTMIIHDADRLGLSQLYQLRGRVGRSNRMAYAFLLYKRDKLLKEVAEKRLSAIREFTDLGSGFKIAMRDLEIRGAGNLLGAEQHGHMEAVGYDLYCKMLNEAVRHLKGEVEETPYTTTVDLNVDAYIPASYIPNEYQKLDIYKRIAGIESEEEMDDMVEELIDRFGDIPRKVQKLLAIANLKAMAHRLYITAVEQKGEAYQFTMFEHAKIRTERIPKLLELYKEELNFKMETPPYFLYRKKNRNRRGKEEDPIEVVKKVLIDMKTLLE*