ggKbase home page

L3_101_000G1_scaffold_126_29

Organism: L3_101_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 18
Location: comp(30942..31685)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=4 Tax=Lachnospiraceae RepID=E9RW96_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 247.0
  • Bit_score: 462
  • Evalue 1.70e-127
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 247.0
  • Bit_score: 462
  • Evalue 2.40e-127
RNA polymerase, sigma 29 subunit, SigE similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 246.0
  • Bit_score: 372
  • Evalue 8.60e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lachnospiraceae bacterium 9_1_43BFAA → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 744
ATGGTAACAAATGCAATGCTGCCAAAACAATTCAGAGCAAAGTTATTGTCACAGTTTCGCAAGATCGTTATCGGATCGAGAAGAGAGATTCATTACATAGGAGGGTCGGAAGTGCTCCCGGCGCCATTGGAGATGGAAGAGGAGAGCGCGGTTATCCGGGAACTGGCGACAGAATATAATGAAAAGGCCAAGAAGGTGCTGATTGAACATAACCTCAGACTTGTGGTGTATATTGCGAAGAAGTTCGACAACACGGGAATCGGGGTGGAAGATCTGATCTCAATAGGGACGATCGGTCTGATCAAGGCGATCAACACATTTAACCCGACAAAGAAGATTAAGCTTGCAACTTATGCATCCAGGTGTATCGAGAATGAGATCTTGATGTATCTGAGGAGAAATAACAAGACGAAACTGGAGGTGTCAATCGATGAACCGCTAAACGTGGACTGGGATGGAAATGAACTGCTACTGTCGGACATCCTCGGGACGGAGGAGGATACGATCTACCGCGACCTGGAGACAGAGGCGGAACAGAAAATGCTGCGGAAAGCTATTGAAAAACTGTCACCGAGGGAGAAGACGATTGTCGAGATGCGCTTTGGAATCAACCATTCAGAGGGGGAGGAGAAGACACAGAAAGAAGTTGCAGATCTTTTGGGAATCTCCCAGTCTTATATCTCACGTCTGGAAAAGAAGATCATGCAGAGACTAAGAAGAGAGATTGTGCGCTGTGAATCGTAG
PROTEIN sequence
Length: 248
MVTNAMLPKQFRAKLLSQFRKIVIGSRREIHYIGGSEVLPAPLEMEEESAVIRELATEYNEKAKKVLIEHNLRLVVYIAKKFDNTGIGVEDLISIGTIGLIKAINTFNPTKKIKLATYASRCIENEILMYLRRNNKTKLEVSIDEPLNVDWDGNELLLSDILGTEEDTIYRDLETEAEQKMLRKAIEKLSPREKTIVEMRFGINHSEGEEKTQKEVADLLGISQSYISRLEKKIMQRLRREIVRCES*