ggKbase home page

L3_101_044G1_scaffold_4397_2

Organism: L3_101_044G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: 87..950

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 287.0
  • Bit_score: 566
  • Evalue 1.80e-158
tRNA pseudouridine synthase B n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6SAN4_FINMA similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 287.0
  • Bit_score: 566
  • Evalue 1.30e-158
tRNA pseudouridine 5S synthase similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 287.0
  • Bit_score: 541
  • Evalue 1.20e-151

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Finegoldia magna → Finegoldia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 864
ATGGATTGCGTAATTAATGTTTTTAAGGAAAAAGGATATACCTCTCAGGATGTTGTTTCTATATGTAAAGGAATTTTAAAAACTAAGAAGATTGGACATGCTGGGACTCTAGATCCTGATGCTACCGGAGTTTTGTTATTAGGCGTTGGAAAAGGAACTAAAATAACAGAATATCTAATGGAATATGGTAAAACATATATATTTGAAATGTGTTTTGGAACAAGTACAGATACTCTTGATTTATCCGGTAATGTCACAGGTTTTTCAGAGAAAACATACGATAAAGAAAAATTAAAGGAAATTTTAGATGATTTAAGTGGTAAAACCATTGAACAAGTACCTCCTATGTATTCCGCAGTTAAGGTAAATGGAAAAAAACTTTATGAATACGCAAGAGAAAACAAGGAAATTAATAGAAAATCCAGAAAAATTACAATCTATAATATAGAACCATTATATCTTCTAGAAAATTCTTGTATAATCAAAGTTAAATGTTCTAAGGGAACGTATATTAGAGTTTTGATTGAAGATATTGCTAAAAAATTAGGTAGATTAGCATATATGAAATCTCTTATCAGAGTAAATTCTGGAGGTTTCGACATAAAAGATTCAGTAAAAATAGAATCGCTTAGAAAATGTAACATTGAAGATGTATCATTTTCAGTCTACGAAAGTTTGACAGAAATGAAATCTATCGAACTTGATGATAATTTATATAAAAAAATAACCAATGGTGTTAAAATAAATATAAACCACGAAAACATTGATAATATTAAAGTAGTTTGTAATAATAAATTTATTGGAATTGGTAGTATTGAAGATAATATTTTAAAAATGAATAAGGTATTTGATATATGCAAATAA
PROTEIN sequence
Length: 288
MDCVINVFKEKGYTSQDVVSICKGILKTKKIGHAGTLDPDATGVLLLGVGKGTKITEYLMEYGKTYIFEMCFGTSTDTLDLSGNVTGFSEKTYDKEKLKEILDDLSGKTIEQVPPMYSAVKVNGKKLYEYARENKEINRKSRKITIYNIEPLYLLENSCIIKVKCSKGTYIRVLIEDIAKKLGRLAYMKSLIRVNSGGFDIKDSVKIESLRKCNIEDVSFSVYESLTEMKSIELDDNLYKKITNGVKININHENIDNIKVVCNNKFIGIGSIEDNILKMNKVFDICK*