ggKbase home page

L3_105_245G1_scaffold_336_27

Organism: L3_105_245G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 27704..31189

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1161.0
  • Bit_score: 2275
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WGM0_EGGLE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1161.0
  • Bit_score: 2275
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 1161.0
  • Bit_score: 2275
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Eggerthella lenta → Eggerthella → Eggerthellales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3486
ATGCTCATCGATTCATTGACGTTCACCCTGGAGAAATCGGGCTGCCTCGACGCGTTCTGGGGCAAGCTGGACGCGGGCGAGGACGGCACGCTGGGCGTGGCCTCGTCGGCGCGCCCGTTCCTCGTGGCGGCGCGGTTCGCGCACAGGCCCCAGCCGACGCTCGTCGTGGTGGCGGGCGAGGACGCGGCCGTGGCGTTCTCGCGCAGCCTGGCGGCCTACCTGGGCGACGAGCGCGTCATGCGCTTCCCCGAGCGCAGCGACTACCCCTTCGTGCCGAAGCCCAGCGACCCTGCGCAGGTGGCACGGCGCATGGAGGCCGTGCACGCGCTGGCCAGCGGCCGCGAGGTCGTGGTGGTAGCCAGCGCCCGCGCGCTCGTGCGCGCGCTGCCGCCGGCGGGCTCCGACGTGCACGTGCCGGTGGCGCTTTCGGCGGGCCGCGAGCTGGCGGCCATGCCCGGCGCTCAGGCGGCGAGCGTCACCGAGTTCGAGGATTTTGCCCATGCGCTGGAGGAGCGCGGCTACCGGAACACCGGCGAGCTGGACGGCCCCGGCACCTTCGCCGTGCGCGGCGGCACGATCGACGTGTTCCCCGGCAACCTCGTGTACCCGGTGCGGCTGGACTTCTTCGGCGACGAGCTGGAGGAGATCCGCCGCATCGTGCCCACCACCGGGCAGACCATCCAGGCGCTGCCGGACGTGAGCATCTACCCCGTGGTGGAGTTCTCGTGCTCCAAGCGGGGGCTCGCCCGCGCGCGCCAGAAGCTGGAGCGGCCGGCCGCGACGAACCCCGTGCTGCGCGACGTGCTGGAGAAGCTGGACGGCGGCCTGCGCTTCGACGGTTCCGACATGCTGCTGCCGTACCTGTACGCGACCACGTCCACGTTGGGCGATTACGTGCGCCCCGGCGCGCTGAGCGTGCTTTTGGAGCCGCGCTCGCTGTTCGACGACATGAGCCACGCCTACGACGACGCGGCGGGACGCGCGAAGGGATCGAGCATCCCCGTGGACGGGCTGTACGCCGAGCCCGGGGCCGTGAGCTTCGGCGAGGGGCAGCGCGCAACCTACGTGTCCATCATGCGCGTGGGCGGGCACGTGGACGACGAGCTGCCGGTGAAGCGCGTGGAGGTGGCGGGGCATCCCGACAAGCTGTTCGGTCGGCTGCGCAGCCTCGTGGACACCGACTACACGGTGGTGTTCAGCGCGTCGAACTTCCGTGCGCGCCAGGACATGAAGCTGGCGTTCGTCGACCACGGTCTGCCGATCCAAGAGACGCTGGACGCGGAAGAGGACGCCGACGAACTGGAAGGTATCGCCAAGCGCCGTCTGCGGCGGGGCGTGGTTAACGTGGTGGACGTGGACGTCCCCCTGGGCATGATCATCCCGAAGGCGAAGCTGGCCATCGTCAGCCTGTCGGACACGCAGGGGGCGTCCACGTCGCGGCCGTCGCGCCACGTGGACATCACCGAGATCACCTTCCCGTACCAGCCGGGCGACTACGTGGTGCACGCCGCTCACGGCGTGGCCTACTTCAAGGAGCTGGTCCGCCGCGACGTGGACGGCACCGCGCGCGACTACCTGCTGCTGGAGTACTCCGAGGGCGACAAGCTGTACGTGCCGGTGGAGCAGCTCGACCGCGTGACGCGCTACGTGGGGCCGGAGGGCGCGAGCCCGCGCCTTACGCGCCTGAACACGGCCGATTGGTCGCGAGCGCTGGCCAAGGCACGCAAGGCCACGAAGAAGCTGGCGTTCGACCTGGTGGACGTGTACGCGCGCCGCGCGTCCGTGCAAGGCTACCGCTTCGGGCCCGACACCGCGGCCCAACGCGAGATGGAGGAGGCGTTCCCCTACCAGGAGACGCCCGACCAGCTGGCCGCCATCGCGGACGTGAAGGCCGACATGCAGTCGGCGAAGCCCATGGACCGCCTCGTCTGCGGCGACGTGGGCTTCGGCAAGACCGAGGTGGCCCTGCGCGCCGCGTTCAAGGCGACGCAGGACTCCAAGCAGGTGATGGTGCTGTGCCCCACCACCATCCTCGCGCAGCAGCACTACACCAACTTCAAGGAGCGCTGCGAGCCGTTCGGCGTGCGCGTGGAGGTGCTCTCGCGCTTCCGCACGCCCGCGCAGCAGGCCGCCGCCCTCAAGGGCTTCCAGGAAGGTGACGTGGACGTGCTGGTGGGCACGCACCGTTTGCTGTCGCGCGATGTGAACCCGCACGACCTGGGGCTGGTCATCATCGACGAGGAGCAGCGCTTCGGCGTGGGCCACAAGGAGCAGATGAAGAACCTGCGCGAGTCCATCGACGTGCTCACGCTGTCGGCCACGCCCATCCCTCGCACCATGCAGATGTCGCTGTCGGGCGTGCGCGACATGAGCCTCATCCTCACGCCGCCCGACGAGCGCCGTCCCGTGGAAGTGCACGTGGGCGAGTGGGATCCCGACGTGGTGAGCGGCGCTATCAGGCGCGAGCTGGCGCGCGGCGGCCAGGTGTACTACGTGTCGAACCGCGTGCGCTCCATGGAGGAGGCGGTGCGGCGCGTCACCGCGGCCGCGGGCGAGGCGCGCGTGGGCGTGGCGCACGGGCAGATGTCGAAGGAGCAGCTGGAGCGCGTGATGGAGGACTTCAGCGCCGGCGAGCTGGACGTGCTGGTGGCCACCACCATCATCGAGAGCGGCATCGACAACCCGCACACGAACACGCTCATCATCGAGGACTCGCAGCGCTACGGATTGGCGCAGATGTACCAGCTGAAGGGCCGCGTGGGCCGTTCGTGCACGCAGGCGTACGCCTACTTCATGTTCCCCGAGCACATGGAGCTCACCGAGGAGGCGGCCGCGCGCCTGACCGCGCTGAACGAGCATACCGATCTCGGCAGCGGCATGCGCATCGCCATGCGTGACCTGGAGATCCGCGGCGCGGGCAGCCTGCTGGGCGCCGAGCAGTCGGGCAACATGTCCGCAGTGGGCTTCGACCTGTTCGCGCAGATGCTGAACCAGGCCGTGAGCGCCACGCGCGAAGGCGACCTCAAGGCCATGGACGCGCTGCCGCCCGCGCTCAGCGATATCACGGTGAACGTGCCGGGGCACACCTACCTGCCCGAAGAGTACGTGCCGGACGCCGACGAACGCGTGCTGTGGTATCGCAGGATAGCCTCGGCCGCCACCGAGCAGGCCGTGGAGGACGTGCGTGCCGACTTGGCCGACAAGCGCCCCGACATGCCGCAGGCGGCGAAGAACCTGTTGGAGAAGGCGCGCATCAAGGCCTACGCCAACGAGCACCATATCAAGACCGTGTCGGTGACGGCGGGCAAGCTGGTGGTGGAGCCCATCGACGTGCCCCGCGACAAGATGACGGGTCTGCGCCGTGCTGGCGGCCGCTACCTGGCCGACAAGCGCAAGCTGTCGCTGCCGCTGCGCTACTTCAAGCTGGACGAAGGCGACAACCTCCTGGCCCCCGTAGCCGAGTTCCTGGAGGAGCTGGCGAAATGA
PROTEIN sequence
Length: 1162
MLIDSLTFTLEKSGCLDAFWGKLDAGEDGTLGVASSARPFLVAARFAHRPQPTLVVVAGEDAAVAFSRSLAAYLGDERVMRFPERSDYPFVPKPSDPAQVARRMEAVHALASGREVVVVASARALVRALPPAGSDVHVPVALSAGRELAAMPGAQAASVTEFEDFAHALEERGYRNTGELDGPGTFAVRGGTIDVFPGNLVYPVRLDFFGDELEEIRRIVPTTGQTIQALPDVSIYPVVEFSCSKRGLARARQKLERPAATNPVLRDVLEKLDGGLRFDGSDMLLPYLYATTSTLGDYVRPGALSVLLEPRSLFDDMSHAYDDAAGRAKGSSIPVDGLYAEPGAVSFGEGQRATYVSIMRVGGHVDDELPVKRVEVAGHPDKLFGRLRSLVDTDYTVVFSASNFRARQDMKLAFVDHGLPIQETLDAEEDADELEGIAKRRLRRGVVNVVDVDVPLGMIIPKAKLAIVSLSDTQGASTSRPSRHVDITEITFPYQPGDYVVHAAHGVAYFKELVRRDVDGTARDYLLLEYSEGDKLYVPVEQLDRVTRYVGPEGASPRLTRLNTADWSRALAKARKATKKLAFDLVDVYARRASVQGYRFGPDTAAQREMEEAFPYQETPDQLAAIADVKADMQSAKPMDRLVCGDVGFGKTEVALRAAFKATQDSKQVMVLCPTTILAQQHYTNFKERCEPFGVRVEVLSRFRTPAQQAAALKGFQEGDVDVLVGTHRLLSRDVNPHDLGLVIIDEEQRFGVGHKEQMKNLRESIDVLTLSATPIPRTMQMSLSGVRDMSLILTPPDERRPVEVHVGEWDPDVVSGAIRRELARGGQVYYVSNRVRSMEEAVRRVTAAAGEARVGVAHGQMSKEQLERVMEDFSAGELDVLVATTIIESGIDNPHTNTLIIEDSQRYGLAQMYQLKGRVGRSCTQAYAYFMFPEHMELTEEAAARLTALNEHTDLGSGMRIAMRDLEIRGAGSLLGAEQSGNMSAVGFDLFAQMLNQAVSATREGDLKAMDALPPALSDITVNVPGHTYLPEEYVPDADERVLWYRRIASAATEQAVEDVRADLADKRPDMPQAAKNLLEKARIKAYANEHHIKTVSVTAGKLVVEPIDVPRDKMTGLRRAGGRYLADKRKLSLPLRYFKLDEGDNLLAPVAEFLEELAK*