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L3_105_245G1_scaffold_722_18

Organism: L3_105_245G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(17673..18032)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilin biogenesis protein n=1 Tax=Escherichia coli O111:H11 str. CVM9545 RepID=I4QK63_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 243
  • Evalue 6.00e-62
hofC_hcpC; assembly protein HofC in type IV pilin biogenesis, transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 243
  • Evalue 1.70e-62
Type IV fimbrial assembly protein PilC {ECO:0000313|EMBL:EFW58452.1}; TaxID=945360 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri CDC 796-83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 243
  • Evalue 8.40e-62

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Taxonomy

Shigella flexneri → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
CAGGGCGTAGAGAGCGTCAGAGAAACAATGCGCTGCCCGTACTGGGTGCAACTTCTGACACAAATCCAGCACGATATCAGTAACGGTCATCCCATCTGGCTGGCGCTAAAAAATACCGGGGAGTTTAGCCCGCTCTGTTTGCAATTAGTGAGAACAGGAGAGGCATCCGGCTCGCTGGACCTCATGTTAGACAACCTCGCCCATCATCATCGGGATAACACAATGGCGCTGGCGGATAACCTCGCAGCCTTACTGGAACCGGCGTTGCTGATCATAACGGGAGGAATTATCGGTACGCTGGTGGTGGCGATGTATCTGCCAATTTTCCATTTAGGCGATGCGATGAGTGGGATGGGATAA
PROTEIN sequence
Length: 120
QGVESVRETMRCPYWVQLLTQIQHDISNGHPIWLALKNTGEFSPLCLQLVRTGEASGSLDLMLDNLAHHHRDNTMALADNLAALLEPALLIITGGIIGTLVVAMYLPIFHLGDAMSGMG*