ggKbase home page

L3_105_357G1_scaffold_221_7

Organism: L3_105_357G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: comp(9616..10149)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=9 Tax=Bacteroides RepID=C6IBC8_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 349
  • Evalue 1.50e-93
putative RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 349
  • Evalue 4.30e-94
RNA polymerase sigma-70 factor, expansion 1 family protein {ECO:0000313|EMBL:EYE43049.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 349
  • Evalue 2.10e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bacteroides fragilis → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 534
ATGGACTTATTCAGCCAGTTCTTTCAAGAAAACCAGAAGAAGTTTCTGTCGTTTGCTTATTCATACACCCGAAATAAAGCCGCAGCCGAAGATATTCTGATGGAAGCAATGGTCAGCCTGTGGGAGAATCGCGAAAAATGGGAAAAAGATTCCAACCTGCATGCATTGCTGCTTACTATCATCAAAAACAAATCACTCAATTATCTTGAACACGAACAAGTGCGTATGAAAGCTGAAGAGGCGATCAATACACATAAGCAACGTGAACTCGATCTCCGTATCTCCACCTTGGAAGCATGCGAACCTGCGACAATTTTCGATACTGAGATACAACGCATCGTATATAAAACACTTGAACAGCTGCCGGAACAAAGCCGCCACATTTTCATATTAAGCCGTTACCACAATACTCCCAATAAGAAGATAGCCGAACAACTCGGCATTTCTATCAAAAGTGTAGAATTTCATATCACCAAAACATTGAAGCTGTTGCGTCTCGAACTCAAAGATTATCTTATATCCCTACTTTTTTAA
PROTEIN sequence
Length: 178
MDLFSQFFQENQKKFLSFAYSYTRNKAAAEDILMEAMVSLWENREKWEKDSNLHALLLTIIKNKSLNYLEHEQVRMKAEEAINTHKQRELDLRISTLEACEPATIFDTEIQRIVYKTLEQLPEQSRHIFILSRYHNTPNKKIAEQLGISIKSVEFHITKTLKLLRLELKDYLISLLF*