ggKbase home page

L3_108_365G1_scaffold_227_1

Organism: L3_108_365G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: 3..245

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 80.0
  • Bit_score: 163
  • Evalue 9.70e-38
2'-5' RNA ligase n=3 Tax=Bacteria RepID=E5X721_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 80.0
  • Bit_score: 163
  • Evalue 6.90e-38
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 79.0
  • Bit_score: 150
  • Evalue 1.70e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Eggerthella sp. HGA1 → Eggerthella → Eggerthellales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 243
GCGCGTCTGCGCGACGAGCTGCGTGCCCGCGACGTGCCCTTCGATGCCAAGCCCTTCAAAGCGCACCTCACCCTCGCGCGCCGCGCTCGCATCCCGCACGTCGGCCTGCCGCACCTGGCGTTTCCCCAAGACGACGAGGCGTACGACGTCACCCTTTACAAGAGCACGCTCGACCGCGCGGGCGCCGCTTACAAGCCGCTGCACACAGTGCGCCTCGGAACCATCGCAGCCGAGCGTTCCTAG
PROTEIN sequence
Length: 81
ARLRDELRARDVPFDAKPFKAHLTLARRARIPHVGLPHLAFPQDDEAYDVTLYKSTLDRAGAAYKPLHTVRLGTIAAERS*