ggKbase home page

L3_108_365G1_scaffold_214_14

Organism: L3_108_365G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(15936..19637)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1233.0
  • Bit_score: 2414
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDQ2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1233.0
  • Bit_score: 2414
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 1199.0
  • Bit_score: 1634
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Coprobacillus sp. 29_1 → Coprobacillus → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3702
ATGGCAGATGTCAATAACTTTTCAGCAATCCAAATTGGATTAGCTTCTCCAGAAAAAATTCGTGAATGGTCTTATGGTGAAGTTAAAAAACCTGAAACTATTAATTATCGTTCTCAAAAACCAGAAAAGGATGGTCTCTTCTGTGAAAAGATTTTTGGACCATCTAAGGATTGGGAATGTAGCTGTGGTAAATACAAAAAAGTGAGATATAAAGGTGTTGTCTGTGATCGTTGTGGTGTAGAAGTCACTAAATCTTCTGTACGTCGTGAACGTATGGGACATATTGAATTAGCAACTCCAGTTGCTCACATCTGGTATCTAAAAGGGATTCCTTCGAGAATGGGTCTTATTCTTGATATGTCTCCTAAACAATTAGAAGAAATTATTTATTTCGTATCTTATGTTGTAACAGATAAAGGGAGTACACCATTAGAATACAAACAAGTTTTATCTGAAAGAGATTATCGTAACTGTTATGAAAAATTCGGAAATCAGTTTGAAGCCAAAACTGGTGCTGAAGCAATTAAGATTTTACTTCAAAAAGTTGATCTTGATGAAGAATTTGAAACAGTTACTAAAGAATTAAAGGAAGCACAAGGGCAAAGGCGTGCAAAATTAATTAAAAGACTTGAGGCATTAGAAGCATTTAGATCTTCAATGAATCAGCCAGAATGGATGATTCTTGATGTTCTTCCTGTTATTCCACCTGATTTAAGACCAATGTTACAGTTGGATGGTGGACGTTTTGCAACAAGTGATTTGAATGATTTGTATAGACGTGTTATTACACGTAATAATCGTTTAAAGAAATTATTAGAATTAGGAACACCATCAATTATCGTGCAAAATGAAAAACGTATGTTGCAAGAAGCTGTTGATGCTTTAATTGATAATGGACGTCGTTCTAAACCAATTACAGGTGCTGGTGGTAGACCATTAAAATCTTTAAGTCATACACTTAAAGGAAAACAGGGACGTTTCCGTCAAAACTTACTTGGTAAACGTGTTGATTATTCTGGACGTTCAGTTATCGCTGTAGGACCTGATTTAAAGATGTATCAATGTGGTATTCCACGTGAGATGGCTTTGAACTTATTCAAACCATTTGTTATTAGTGGATTGGTAAGAGAACAAATTGCGACAAATATTAAGGCAGCGGAAAGATTGATTGATAAGATGGAAGATTCAATTTGGCCAATCGTAGAAGAGGTTATTAAAGAACATCCAGTTTTATTAAACCGTGCACCTACACTTCATAGATTAGGTATTCAAGCATTCGAACCTAAGTTGGTAGAGGGACGTGCAATTCGTCTTCATCCACTTGTTACGCCTGCTTTCAATGCCGATTTCGATGGTGACCAAATGGCTGTCCATGTTCCTTTAGGAGAAGAAGCAATCCAAGAAGCAAGACAGTTAATGCTTGGTTCTAGCAATATCTTAGGTCCAAAAGATGGAAAACCAATTGTTACACCTTCACAGGATATGGTGTTAGGAAATTATTATTTAACATTAGAAGAAGCTGGTAAAATTGGTGAAGGAACTGTCTTTGCTGATGTGAATGAAGTTTTAATGGCTTATGATGCAAAAACTGTTCATTTACACACAAGAGTTGCAATTAGAGGAAAATCATTAAATAACCAAACATTTACAAAATTACAAAATGATAGTTATTTAATTACAAGTGTTGGAAAAATTATTTTCAATCAAATCTTTGATGGAGCATTCCCATTTATTAATGATACAAGTGTTGAGAATTTAGATGCGACACCTAATAAATATTTTGTTCCATTAGGAACAGATATTAAAGCTTATATTGAGAGTCAACCAATTATCAAACCATTTGGTAAAAAAGCTTTAGGAAATATCATTAATCAAGTATTTAAGACAAGCAAAACAACTGATACAACTGCAATGCTTGATAAATTGAAAGATCAAGGATTCTATTATTCAACAATTGCAGGGATTACAGTTTCTGTATATGATATTCAAGTTCCACAAAGTAAATATGTTTTATTTGAAGAAGCTGATGAAAAACTTGAAAGAATCAAGGGATTATATCGTAAAGGTAAGTTAACTGAAGAAGAGAGAAAGAATGCAGTTGTTAAACTTTGGGAAAGTGTTAAAGATCAAGTTCAAGGTGTCGTTAAAGAAGAGTTCGAAGCTGATACTAAGAATCCAATCTTCATCATGTCTGACTCAGGTGCCCGTGGAAATATCTCTAACTTTACACAGTTGGTAGGTATGCGTGGATTGATGTCAAACCCTAAAGGAGAAACAATTGAACTTCCTATCAAGTCTTCATTTAGAGAAGGTTTAACTGCATCAGAATTCTTTATTTCTACCCATGGTGCCCGTAAAGGTTCTACTGATACAGCCTTGAAAACAGCCGATTCAGGTTACTTAACAAGACGTTTGGTAGATGTTGCACAAGAGGTCATCATTACTGAAGATGATTGTGGTACAGATAGAGGATTTATGGTTAGTGAATTATACAATACTTCTGATAATTCTGTTATTGTTCCATTATATGACAGATTAGTTGGACGTTATTCACAAAAAGATATTATTCATCCAGTGACAGGTGAAATGATTGTAAAAGCAGGTGAAATGCTTGATGAAACAAATGCAAAAGAAGTCACTGATGCTGGAATTAAAGAAGTTGAAATTAGATCTGTCCTTGGATGTAAAGCCAAAGGTGGAATCTGTAGAAAATGTTATGGTCGTAACTTAGCGACTGGAGAAGAAGTCTTATTAGGTGAAGCAATCGGAATTATGGCAGCTCAATCTATTGGTGAACCTGGTACACAGTTAACAATGCGTACATTCCACATGGGTGGGGTTGCTGGTGGTGCTGATATCACTCAAGGGTTACCTCGTATTCAAGAGTTATTTGAAGCAAGAAATCCGAAAGCAAAATCTATTATTTCTGAAATTGAAGGTGAAGTTTCAAACATCATTGATAACAATGGTCGTGCTGAAGTTGTTGTCTCTAACTTATTAGAAACAAAGAGTTACTTGGCTCCTTATGGTGCAAAACTTAGAGTTTCTGTTGGGGATGAAGTCGGTATTGGTTCTAAGATTACTGAAGGGTCTATTGATCCTAAGGAATTGTTAGGTGTTGCTGATGTTGAAGCAGTTGAAAACTATATCTTAAAAGAAGTTCAAAAAGTCTATCGTTTACAAGGTATCGAGATTTCTGATAAACATATCGAAGTTATTGTTAGACAAATGTTGAAGAAGATGAGAATTGTTGAAGGTGGAGACACTGGTGCACTTCCAGGAACACATGTGAATACAGAAAGATTTACTGAATTAAACAAAGATGTTCTTAAGAATGGTAAGCATCCAGCAGTTGGAAGACCAATCTTGCTTGGTATTACAAAAGCTTCACTTGAAACAGAATCATTCTTATCTGCTGCATCATTCCAAGAAACAACAAAAATCTTAACTGATGCTGCAATTAAAGGTAAAGTTGATGATTTAATTGGATTAAAGGAAAATGTTATCATTGGTAAATTATTACCAGCTGGTACTGGATTAAGAGGTGCGTTAAAATCTCCTGAGACAATAGCAAGAGAGTTAGAAGCAGAGAGAAAACGTATTGAATTAGAAGCTGCTGAAAAATTAGAAGCTGAAACATTATCAGAAGATTTATTAAGTGGTGAAACTGAAGAACAGTTTGCATCAGTTGAAGAAATCTAA
PROTEIN sequence
Length: 1234
MADVNNFSAIQIGLASPEKIREWSYGEVKKPETINYRSQKPEKDGLFCEKIFGPSKDWECSCGKYKKVRYKGVVCDRCGVEVTKSSVRRERMGHIELATPVAHIWYLKGIPSRMGLILDMSPKQLEEIIYFVSYVVTDKGSTPLEYKQVLSERDYRNCYEKFGNQFEAKTGAEAIKILLQKVDLDEEFETVTKELKEAQGQRRAKLIKRLEALEAFRSSMNQPEWMILDVLPVIPPDLRPMLQLDGGRFATSDLNDLYRRVITRNNRLKKLLELGTPSIIVQNEKRMLQEAVDALIDNGRRSKPITGAGGRPLKSLSHTLKGKQGRFRQNLLGKRVDYSGRSVIAVGPDLKMYQCGIPREMALNLFKPFVISGLVREQIATNIKAAERLIDKMEDSIWPIVEEVIKEHPVLLNRAPTLHRLGIQAFEPKLVEGRAIRLHPLVTPAFNADFDGDQMAVHVPLGEEAIQEARQLMLGSSNILGPKDGKPIVTPSQDMVLGNYYLTLEEAGKIGEGTVFADVNEVLMAYDAKTVHLHTRVAIRGKSLNNQTFTKLQNDSYLITSVGKIIFNQIFDGAFPFINDTSVENLDATPNKYFVPLGTDIKAYIESQPIIKPFGKKALGNIINQVFKTSKTTDTTAMLDKLKDQGFYYSTIAGITVSVYDIQVPQSKYVLFEEADEKLERIKGLYRKGKLTEEERKNAVVKLWESVKDQVQGVVKEEFEADTKNPIFIMSDSGARGNISNFTQLVGMRGLMSNPKGETIELPIKSSFREGLTASEFFISTHGARKGSTDTALKTADSGYLTRRLVDVAQEVIITEDDCGTDRGFMVSELYNTSDNSVIVPLYDRLVGRYSQKDIIHPVTGEMIVKAGEMLDETNAKEVTDAGIKEVEIRSVLGCKAKGGICRKCYGRNLATGEEVLLGEAIGIMAAQSIGEPGTQLTMRTFHMGGVAGGADITQGLPRIQELFEARNPKAKSIISEIEGEVSNIIDNNGRAEVVVSNLLETKSYLAPYGAKLRVSVGDEVGIGSKITEGSIDPKELLGVADVEAVENYILKEVQKVYRLQGIEISDKHIEVIVRQMLKKMRIVEGGDTGALPGTHVNTERFTELNKDVLKNGKHPAVGRPILLGITKASLETESFLSAASFQETTKILTDAAIKGKVDDLIGLKENVIIGKLLPAGTGLRGALKSPETIARELEAERKRIELEAAEKLEAETLSEDLLSGETEEQFASVEEI*