ggKbase home page

L3_108_365G1_public_UNK

In projects: L3_108_365G1_public
Displaying items 401-450 of 16780 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_108_365G1_scaffold_15291 1 1108 bp 33.57 2.98 82.04
L3_108_365G1_scaffold_15339
Species: RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated (50%)
2 1104 bp 40.04 2.99 96.47
L3_108_365G1_scaffold_12928
Species: Bifidobacterium longum (100%)
1 1304 bp 58.82 2.99 72.70
L3_108_365G1_scaffold_16966
Species: Lachnospiraceae bacterium 1_4_56FAA (50%)
2 1005 bp 47.66 2.99 97.61
L3_108_365G1_scaffold_16967
Species: Peptoclostridium difficile (100%)
1 1005 bp 41.79 2.99 98.21
L3_108_365G1_scaffold_16980
Species: [Clostridium] bolteae (100%)
1 1004 bp 57.47 2.99 83.37
L3_108_365G1_scaffold_11216
Species: Enterobacter cloacae (100%)
2 1505 bp 61.13 2.99 100.07
L3_108_365G1_scaffold_17025 3 1002 bp 26.55 2.99 59.88
L3_108_365G1_scaffold_11997
Species: Ruminococcus sp. CAG:254 (50%)
2 1405 bp 42.78 2.99 85.41
L3_108_365G1_scaffold_12010
Species: Clostridium botulinum (50%)
2 1404 bp 29.42 2.99 101.07
L3_108_365G1_scaffold_12014
Species: Clostridium clostridioforme CAG:132 (50%)
2 1404 bp 51.14 2.99 98.08
L3_108_365G1_scaffold_11570
Species: Lachnospiraceae bacterium 1_4_56FAA (50%)
2 1456 bp 43.68 2.99 100.14
L3_108_365G1_scaffold_14040
Species: Lelliottia amnigena (50%)
2 1202 bp 47.00 3.00 64.14
L3_108_365G1_scaffold_10865
Species: Erysipelatoclostridium ramosum (50%)
2 1549 bp 37.96 3.00 91.61
L3_108_365G1_scaffold_14061
Species: Enterobacter cloacae (66.67%)
3 1201 bp 59.03 3.00 93.42
L3_108_365G1_scaffold_8463
Species: Blautia obeum (100%)
1 2000 bp 46.80 3.00 98.25
L3_108_365G1_scaffold_16167
Order: Clostridiales (66.67%)
3 1050 bp 52.19 3.00 69.71
L3_108_365G1_scaffold_14064
Species: Holdemania filiformis (100%)
2 1200 bp 46.42 3.00 65.50
L3_108_365G1_scaffold_14078
Species: Alkaliphilus oremlandii (100%)
1 1199 bp 28.19 3.00 99.83
L3_108_365G1_scaffold_12950
Species: [Clostridium] clostridioforme (100%)
1 1301 bp 58.03 3.00 99.85
L3_108_365G1_scaffold_12970
Species: [Clostridium] clostridioforme (50%)
2 1298 bp 51.39 3.00 66.10
L3_108_365G1_scaffold_17037
Species: Blautia sp. CAG:37 (100%)
1 1001 bp 43.46 3.00 85.41
L3_108_365G1_scaffold_15424
Species: Treponema azotonutricium (100%)
2 1099 bp 48.32 3.00 98.00
L3_108_365G1_scaffold_12498
Species: Bifidobacterium bifidum (100%)
2 1352 bp 52.22 3.00 78.55
L3_108_365G1_scaffold_12027
Order: Clostridiales (100%)
3 1401 bp 42.18 3.00 88.65
L3_108_365G1_scaffold_14725
Species: Lachnospiraceae bacterium 1_4_56FAA (100%)
3 1149 bp 45.52 3.00 99.74
L3_108_365G1_scaffold_9384
Species: [Clostridium] symbiosum (100%)
2 1803 bp 47.92 3.00 87.35
L3_108_365G1_scaffold_14101
Species: Clostridium sp. 7_3_54FAA (50%)
2 1197 bp 45.70 3.01 81.70
L3_108_365G1_scaffold_14103
Species: Escherichia coli (100%)
1 1197 bp 49.54 3.01 99.50
L3_108_365G1_scaffold_16240
Species: [Clostridium] bolteae (100%)
1 1046 bp 44.55 3.01 68.55
L3_108_365G1_scaffold_15454
Species: [Clostridium] bolteae (100%)
2 1097 bp 52.23 3.01 99.82
L3_108_365G1_scaffold_13002
Species: Clostridium novyi (50%)
2 1296 bp 43.83 3.01 56.71
L3_108_365G1_scaffold_13009
Species: Bifidobacterium longum (100%)
1 1295 bp 57.76 3.01 85.48
L3_108_365G1_scaffold_13524
Species: Clostridium perfringens (100%)
3 1247 bp 25.50 3.01 66.16
L3_108_365G1_scaffold_10549
Species: Enterobacter cloacae (100%)
1 1595 bp 61.13 3.01 97.99
L3_108_365G1_scaffold_14765
Species: [Clostridium] clostridioforme (100%)
2 1146 bp 53.23 3.01 84.56
L3_108_365G1_scaffold_8151
Species: Hungatella hathewayi (100%)
2 2094 bp 44.08 3.01 100.00
L3_108_365G1_scaffold_13071
Species: [Clostridium] clostridioforme (100%)
1 1290 bp 52.02 3.02 99.77
L3_108_365G1_scaffold_12112
Species: Coprobacillus sp. 29_1 (100%)
2 1392 bp 29.89 3.02 76.29
L3_108_365G1_scaffold_12123
Species: Bacteroides vulgatus (100%)
1 1391 bp 30.41 3.02 99.86
L3_108_365G1_scaffold_12124
Species: Clostridium argentinense (50%)
2 1391 bp 46.44 3.02 87.56
L3_108_365G1_scaffold_14826
Species: Clostridium sp. D5 (100%)
1 1142 bp 47.90 3.02 99.82
L3_108_365G1_scaffold_14838
Species: Clostridium sp. 7_2_43FAA (50%)
2 1141 bp 31.81 3.02 92.29
L3_108_365G1_scaffold_11689
Species: Clostridium bolteae CAG:59 (100%)
2 1442 bp 47.02 3.02 68.24
L3_108_365G1_scaffold_16276
Species: Treponema primitia (50%)
2 1044 bp 38.79 3.02 76.44
L3_108_365G1_scaffold_14184
Species: [Clostridium] symbiosum (100%)
1 1192 bp 42.62 3.02 99.66
L3_108_365G1_scaffold_11310
Order: Clostridiales (66.67%)
3 1492 bp 36.53 3.02 80.23
L3_108_365G1_scaffold_11340
Species: [Clostridium] bolteae (100%)
1 1489 bp 52.79 3.02 97.92
L3_108_365G1_scaffold_15530
Species: Hungatella hathewayi (100%)
1 1092 bp 48.81 3.02 99.73
L3_108_365G1_scaffold_11352
Species: [Clostridium] bolteae (66.67%)
3 1488 bp 49.80 3.02 98.19
Displaying items 401-450 of 16780 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.