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L3_108_365G1_public_UNK

In projects: L3_108_365G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 96.34 Longest contig: 577.64 Kbp Bin length: 124.23 Mbp GC content: 46.64 %
Contigs count: 16780 Features count: 133523 rRNAs count: 20 tRNAs count: 1943

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Displaying items 16301-16350 of 16780 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_108_365G1_scaffold_7585
Species: Ruminococcus sp. 5_1_39BFAA (50%)
2 2264 bp 46.11 5.63 100.31
L3_108_365G1_scaffold_6731
Species: Holdemania filiformis (100%)
3 2587 bp 45.11 5.97 100.31
L3_108_365G1_scaffold_13130
Species: Oscillibacter sp. KLE 1745 (100%)
2 1283 bp 63.37 5.14 100.31
L3_108_365G1_scaffold_10555
Species: [Clostridium] bolteae (100%)
3 1594 bp 55.90 3.95 100.31
L3_108_365G1_scaffold_13219
Species: Ruminococcus sp. CAG:9 (50%)
2 1274 bp 41.76 3.65 100.31
L3_108_365G1_scaffold_13224
Species: Oscillibacter sp. KLE 1745 (100%)
2 1274 bp 59.73 6.24 100.31
L3_108_365G1_scaffold_10564
Species: Streptococcus sp. HSISS2 (50%)
2 1591 bp 42.55 22.72 100.31
L3_108_365G1_scaffold_10576
Species: Holdemania filiformis (100%)
2 1588 bp 55.04 5.76 100.32
L3_108_365G1_scaffold_13448
Species: Marvinbryantia formatexigens (50%)
2 1253 bp 53.55 5.27 100.32
L3_108_365G1_scaffold_13456
Species: Holdemania filiformis (100%)
3 1253 bp 59.78 6.82 100.32
L3_108_365G1_scaffold_9084
Species: Oscillibacter sp. KLE 1745 (100%)
3 1866 bp 64.95 4.26 100.32
L3_108_365G1_scaffold_9162
Species: Lachnospiraceae bacterium 2_1_58FAA (66.67%)
3 1851 bp 38.52 193.44 100.32
L3_108_365G1_scaffold_9176
Species: Ruminococcus sp. CAG:60 (50%)
2 1848 bp 40.04 4.95 100.33
L3_108_365G1_scaffold_10980
Species: butyrate-producing bacterium SS3/4 (50%)
4 1534 bp 52.74 3.13 100.33
L3_108_365G1_scaffold_13769
Species: Oscillibacter sp. KLE 1745 (100%)
2 1226 bp 65.58 4.65 100.33
L3_108_365G1_scaffold_11017
Species: Blautia hansenii (100%)
3 1528 bp 31.15 193.78 100.33
L3_108_365G1_scaffold_13823
Species: [Clostridium] clostridioforme (50%)
2 1220 bp 54.92 3.44 100.33
L3_108_365G1_scaffold_13876
Species: Blautia sp. CAG:52 (50%)
2 1217 bp 52.92 6.16 100.33
L3_108_365G1_scaffold_8019
Species: Streptococcus sp. C150 (50%)
2 2126 bp 41.11 13.83 100.33
L3_108_365G1_scaffold_11120
Species: Holdemania filiformis (100%)
2 1516 bp 56.27 5.05 100.33
L3_108_365G1_scaffold_5092
Species: Lachnospiraceae bacterium 3_1_57FAA_CT1 (100%)
3 3609 bp 48.68 5.44 100.33
L3_108_365G1_scaffold_14038
Genus: Enterobacter (50%)
4 1202 bp 54.08 5.74 100.33
L3_108_365G1_scaffold_9387
Species: [Clostridium] symbiosum (100%)
2 1803 bp 50.86 4.49 100.33
L3_108_365G1_scaffold_9451
Species: [Clostridium] bolteae (100%)
2 1788 bp 54.81 4.19 100.34
L3_108_365G1_scaffold_14249
Species: Anaerotruncus colihominis (100%)
2 1187 bp 48.78 4.30 100.34
L3_108_365G1_scaffold_11416
Genus: Enterobacter (66.67%)
3 1480 bp 60.81 4.05 100.34
L3_108_365G1_scaffold_14333
Species: Firmicutes bacterium CAG:227 (50%)
2 1181 bp 48.26 3.18 100.34
L3_108_365G1_scaffold_6607
Species: Clostridium sp. CAG:299 (100%)
3 2646 bp 47.77 5.16 100.34
L3_108_365G1_scaffold_11494
Species: Enterobacter cloacae (100%)
3 1468 bp 54.29 5.52 100.34
L3_108_365G1_scaffold_14614
Species: Clostridium bolteae CAG:59 (50%)
2 1157 bp 52.72 2.72 100.35
L3_108_365G1_scaffold_9728 2 1728 bp 45.83 20.92 100.35
L3_108_365G1_scaffold_11739
Order: Clostridiales (66.67%)
3 1435 bp 49.27 6.17 100.35
L3_108_365G1_scaffold_9882
Species: Streptococcus salivarius (100%)
3 1701 bp 43.97 35.01 100.35
L3_108_365G1_scaffold_16543
Species: [Eubacterium] siraeum (50%)
2 1695 bp 53.69 120.44 100.35
L3_108_365G1_scaffold_14972
Species: Holdemania filiformis (100%)
2 1130 bp 49.47 5.84 100.35
L3_108_365G1_scaffold_15400
Species: Planomicrobium glaciei (50%)
2 1100 bp 42.09 3.82 100.36
L3_108_365G1_scaffold_15414
Species: [Clostridium] symbiosum (50%)
2 1100 bp 52.55 111.41 100.36
L3_108_365G1_scaffold_15726
Species: Pseudoflavonifractor capillosus (50%)
2 1079 bp 58.02 3.06 100.37
L3_108_365G1_scaffold_8996
Species: Anaerotruncus colihominis (100%)
2 1883 bp 51.04 6.53 100.37
L3_108_365G1_scaffold_15815
Species: Blautia sp. CAG:257 (50%)
2 1073 bp 41.94 3.77 100.37
L3_108_365G1_scaffold_6528
Species: Holdemania filiformis (100%)
2 2678 bp 52.91 6.11 100.37
L3_108_365G1_scaffold_15861
Species: Clostridium sp. D5 (50%)
2 1070 bp 47.85 4.07 100.37
L3_108_365G1_scaffold_9056
Species: Coprobacillus sp. 8_2_54BFAA (50%)
2 1871 bp 28.33 5.69 100.37
L3_108_365G1_scaffold_9139
Species: Veillonella parvula (66.67%)
3 1856 bp 42.94 4.04 100.38
L3_108_365G1_scaffold_9138
Species: Streptococcus thermophilus (100%)
2 1856 bp 42.08 54.55 100.38
L3_108_365G1_scaffold_8078
Species: Lachnospiraceae bacterium 1_4_56FAA (100%)
3 2113 bp 34.64 4.47 100.38
L3_108_365G1_scaffold_12839
Species: [Eubacterium] dolichum (100%)
2 1315 bp 28.59 3.88 100.38
L3_108_365G1_scaffold_5396
Species: Ruminococcus albus (100%)
3 3371 bp 36.52 5.52 100.39
L3_108_365G1_scaffold_26014
Species: Erysipelotrichaceae bacterium 6_1_45 (50%)
2 1031 bp 53.54 604.80 100.39
L3_108_365G1_scaffold_16548
Species: [Clostridium] bolteae (50%)
2 1028 bp 51.36 2.92 100.39
Displaying items 16301-16350 of 16780 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.