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L3_114_000M1_public_UNK

In projects: L3_114_000M1_public
Displaying items 301-350 of 28509 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_114_000M1_scaffold_12788
Species: Firmicutes bacterium CAG:424 (100%)
1 2595 bp 42.24 21.27 44.51
L3_114_000M1_scaffold_22431 3 1273 bp 36.45 5.54 44.54
L3_114_000M1_scaffold_26277
Order: Clostridiales (66.67%)
3 1096 bp 26.37 7.39 44.62
L3_114_000M1_scaffold_28260 1 1026 bp 57.50 3.07 44.74
L3_114_000M1_scaffold_17440
Species: Lactobacillus rhamnosus (100%)
1 1622 bp 43.83 13.59 44.76
L3_114_000M1_scaffold_23458
Species: Bifidobacterium sp. 12_1_47BFAA (100%)
1 1219 bp 55.37 263.45 44.79
L3_114_000M1_scaffold_8444
Species: Faecalibacterium prausnitzii (100%)
4 3342 bp 45.90 11.04 44.79
L3_114_000M1_scaffold_15063
Species: Eubacterium rectale (50%)
2 1866 bp 37.51 6.67 44.86
L3_114_000M1_scaffold_10524
Genus: Clostridium (50%)
4 2673 bp 27.76 6.51 44.89
L3_114_000M1_scaffold_28698
Species: [Clostridium] methylpentosum (50%)
2 1013 bp 47.88 4.44 45.01
L3_114_000M1_scaffold_14400
Species: [Clostridium] asparagiforme (100%)
3 1952 bp 50.00 12.91 45.03
L3_114_000M1_scaffold_17089
Species: Escherichia coli (100%)
3 1652 bp 44.79 7.81 45.04
L3_114_000M1_scaffold_18672
Species: Dorea longicatena CAG:42 (50%)
2 1518 bp 36.63 35.87 45.06
L3_114_000M1_scaffold_25106
Species: Roseburia sp. CAG:50 (100%)
1 1144 bp 43.01 3.54 45.10
L3_114_000M1_scaffold_18230
Species: Hungatella hathewayi (50%)
2 1556 bp 41.13 4.53 45.31
L3_114_000M1_scaffold_25704 1 1118 bp 44.45 53.80 45.35
L3_114_000M1_scaffold_18186
Species: Escherichia coli (100%)
3 1558 bp 47.56 5.01 45.44
L3_114_000M1_scaffold_20823
Species: Actinomyces turicensis (50%)
2 1365 bp 55.97 20.00 45.49
L3_114_000M1_scaffold_14614
Species: Lachnospiraceae bacterium 7_1_58FAA (50%)
2 1924 bp 55.30 4.13 45.53
L3_114_000M1_scaffold_9679
Species: Escherichia coli (100%)
1 2917 bp 51.90 5.55 45.56
L3_114_000M1_scaffold_9595
Species: Escherichia coli (100%)
2 2945 bp 43.87 6.77 45.64
L3_114_000M1_scaffold_24198
Species: Terrisporobacter othiniensis (100%)
2 1183 bp 26.12 5.20 45.65
L3_114_000M1_scaffold_21962
Species: Streptococcus vestibularis (100%)
1 1300 bp 38.08 5.54 45.69
L3_114_000M1_scaffold_14477
Species: Escherichia coli (100%)
3 1943 bp 45.39 4.25 45.70
L3_114_000M1_scaffold_27948
Species: Slackia heliotrinireducens (100%)
1 1036 bp 37.64 3.76 45.75
L3_114_000M1_scaffold_25975
Species: Bacteroides xylanisolvens (100%)
1 1108 bp 28.07 73.65 45.76
L3_114_000M1_scaffold_21896
Species: Clostridium sp. ATCC BAA-442 (100%)
1 1303 bp 57.41 2.76 45.82
L3_114_000M1_scaffold_26441
Species: Clostridium bartlettii CAG:1329 (100%)
1 1091 bp 25.66 7.84 45.92
L3_114_000M1_scaffold_19939
Species: [Eubacterium] eligens (50%)
2 1424 bp 39.54 17.59 45.93
L3_114_000M1_scaffold_25019
Species: Streptococcus salivarius (50%)
2 1147 bp 40.54 5.49 46.03
L3_114_000M1_scaffold_22027
Species: Ruminococcus sp. 5_1_39BFAA (100%)
2 1296 bp 38.97 13.54 46.06
L3_114_000M1_scaffold_23040
Genus: Streptococcus (100%)
3 1242 bp 37.44 6.40 46.14
L3_114_000M1_scaffold_8574
Species: Bacteroides ovatus (66.67%)
3 3286 bp 34.39 18.30 46.20
L3_114_000M1_scaffold_17808
Species: Brevibacillus borstelensis (50%)
2 1589 bp 30.14 3.30 46.26
L3_114_000M1_scaffold_27523
Species: Firmicutes bacterium CAG:270 (100%)
1 1050 bp 26.67 10.14 46.29
L3_114_000M1_scaffold_28154
Species: Bifidobacterium longum (100%)
1 1030 bp 66.89 4.51 46.31
L3_114_000M1_scaffold_25071
Species: Roseburia sp. CAG:50 (100%)
1 1145 bp 46.81 5.11 46.38
L3_114_000M1_scaffold_21854
Species: Bifidobacterium longum (100%)
2 1305 bp 48.12 3.91 46.44
L3_114_000M1_scaffold_23076
Species: Pediococcus pentosaceus (100%)
2 1240 bp 40.40 5.32 46.45
L3_114_000M1_scaffold_23097
Species: Streptococcus sp. ACS2 (50%)
2 1238 bp 33.84 9.09 46.53
L3_114_000M1_scaffold_28298
Species: Butyrivibrio proteoclasticus (100%)
1 1025 bp 32.68 4.54 46.54
L3_114_000M1_scaffold_25940
Species: Escherichia coli (100%)
2 1109 bp 39.86 4.73 46.80
L3_114_000M1_scaffold_23390
Species: Clostridium sp. MSTE9 (50%)
2 1223 bp 33.28 3.68 46.85
L3_114_000M1_scaffold_33212
Species: Faecalibacterium prausnitzii (66.67%)
3 1376 bp 54.07 45.89 46.88
L3_114_000M1_scaffold_15161
Species: Firmicutes bacterium CAG:194 (50%)
2 1854 bp 55.12 5.74 46.93
L3_114_000M1_scaffold_26891
Species: Ruminococcus obeum CAG:39 (100%)
1 1074 bp 39.57 4.75 46.93
L3_114_000M1_scaffold_14484
Species: Collinsella stercoris (50%)
2 1942 bp 38.77 3.01 46.96
L3_114_000M1_scaffold_20776
Species: butyrate-producing bacterium SS3/4 (100%)
2 1367 bp 47.26 130.14 46.96
L3_114_000M1_scaffold_28009
Species: Faecalibacterium prausnitzii (100%)
1 1034 bp 44.58 43.81 47.00
L3_114_000M1_scaffold_22494
Species: Bacteroides sp. 2_1_22 (100%)
1 1270 bp 37.24 47.36 47.01
Displaying items 301-350 of 28509 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.