ggKbase home page

L3_121_243G1_scaffold_388_26

Organism: L3_121_243G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: comp(32378..33484)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 354.0
  • Bit_score: 691
  • Evalue 3.60e-196
tRNA pseudouridine synthase B n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XWS6_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 354.0
  • Bit_score: 689
  • Evalue 1.70e-195
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 355.0
  • Bit_score: 674
  • Evalue 9.20e-192

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium kashiwanohense → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGATTTCGACGATGACGACGTCGAAGTCGAAGATTGGGACGATGACGAAGAAGCCTGAACATTCCGGTCTGCTGGTCATCGACAAGCCGCAGGGCGTCACCAGCCATGACGTGGTAGCGGCCGTACGCGGCGCCCTGCATATGAAACGAGTCGGGCATGCGGGCACGCTCGATCCGATGGCCACCGGCGTGCTGGTGGTCGGATTCGGCAATGCCACGCGACTGCTCAACTACATTGTCGACCATAACAAAACGTACGAGGCCACCATTCGCCTTGGGCAGCGCACTACCACGGACGATGCCGAAGGCGAGTTGCTGCCGGGGGAGTGGGCAGAGAGCTTTCCCTCGCGTCAAGCTGTGGAACAGCTGATCGCAGAACGGTTCACCGGGCGCATCGAACAGGTACCGAACGTCTACTCCGCCATTAAGGTCAACGGTCAGCGCGCCTATGATCTGGCGCGTGAAGGTAAGGATGTGGAACTTAAGGCACGTCCTGTGACCATCGAAGAGTTCAACGTACGGCAGGTGCGTTACGGCTACACGCATAGCGATCGTGCCGGCGCGGAACTTGTTGGCGCAGTCGTGGCCGAGAAGGCAAGCGATGGATGGATTGCCAACATTGCACCGCATGAAGACATGCAGCCCGTTATGGAACTCGACGTGACCGTGACCTGTTCCGCAGGCACCTACATTCGCGCGCTCGCACGCGATCTGGGCGAGGAACTCGGGTTGGGAGGCCACCTGACGATGTTGCGGCGCACGCGCGTCGGCAGATTCTCAGTGAATATGCCCAACGTCATGAGCGCCCACGCTGAATCCAAAACATTCACCAATCGTGAAGGCATGGAAGTGACGCGCAATCGTGCGGTGCTTGACGATGCCGATCATGCGCTCGATCATGCGCTCGATCCCGTGGCCAGCGCCGCGGCTTCCATGAGTATGCTGGCCGTCAGCGAGCAAGAGGCGGCCGACTTGCGTTTCGGACGCAGAATCGCGCATGACATACGTACGACCACGGCGGCGTACGTTGAGGAAACCAACGATTTGGTCGCTATCCTCGAACGTGCGAAACGCGGTGAGGCCAAACCGGTCGCGGTATTCAACTGA
PROTEIN sequence
Length: 369
MISTMTTSKSKIGTMTKKPEHSGLLVIDKPQGVTSHDVVAAVRGALHMKRVGHAGTLDPMATGVLVVGFGNATRLLNYIVDHNKTYEATIRLGQRTTTDDAEGELLPGEWAESFPSRQAVEQLIAERFTGRIEQVPNVYSAIKVNGQRAYDLAREGKDVELKARPVTIEEFNVRQVRYGYTHSDRAGAELVGAVVAEKASDGWIANIAPHEDMQPVMELDVTVTCSAGTYIRALARDLGEELGLGGHLTMLRRTRVGRFSVNMPNVMSAHAESKTFTNREGMEVTRNRAVLDDADHALDHALDPVASAAASMSMLAVSEQEAADLRFGRRIAHDIRTTTAAYVEETNDLVAILERAKRGEAKPVAVFN*