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L3_121_243G1_scaffold_11835_2

Organism: L3_121_243G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: comp(545..1063)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJE7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 172.0
  • Bit_score: 344
  • Evalue 6.20e-92
Sigma-70 region 2 {ECO:0000313|EMBL:EFB77307.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 172.0
  • Bit_score: 344
  • Evalue 8.60e-92
ECF family RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 171.0
  • Bit_score: 139
  • Evalue 5.00e-31

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 519
ATGCTAATATACTTGCAAATGATTGACACTCCAGAGGAACGGTCAAAATTTGAACAGATCTATCTGGAGTATAAAGGGCTCATGTTCCATGTGGCCTATGATATTTTACATAATGAGCAGGATGCCGAGGATGCTGTACATCAGGCTTTTGTAAAGGTGGCGGAAAACATTAAAAAAATCGGTGAGCCGGTGTGTCCAAAAACGCATAGCTACGTCGTTACTATTGTTGAGAATAAAGCAATAGATCAGTACCGAAAGCGGCAAAAACACCAGACTGTCGAACTAATTGATGATATTCAAGGGACAGAGGCACATTATGAAGGGAATAACGATTTAACAAAATGCATCTTAAAATTACCTGCCCGTTATCGAGAAATGATATTGCTTCGCTATCATCATGGATACAGTGTTAGAGAGATTACCAACATAATGGACATCTCCCTTGCAGCTGCAATCAAATTGGATCAGCGGGCTAAAAACAAATTGAAAAAATTGTGTGAGGAGGCGGGAATCCTGTGA
PROTEIN sequence
Length: 173
MLIYLQMIDTPEERSKFEQIYLEYKGLMFHVAYDILHNEQDAEDAVHQAFVKVAENIKKIGEPVCPKTHSYVVTIVENKAIDQYRKRQKHQTVELIDDIQGTEAHYEGNNDLTKCILKLPARYREMILLRYHHGYSVREITNIMDISLAAAIKLDQRAKNKLKKLCEEAGIL*