ggKbase home page

L3_122_000M1_scaffold_293_5

Organism: L3_122_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 18
Location: 5365..7413

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 682.0
  • Bit_score: 1327
  • Evalue 0.0
Transcription termination factor Rho n=3 Tax=Parabacteroides merdae RepID=A7AAR8_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 682.0
  • Bit_score: 1327
  • Evalue 0.0
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 691.0
  • Bit_score: 1020
  • Evalue 2.20e-295

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides merdae → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2049
ATGCAAAAATATAACATTCTAGAACTAAATGAAAAACTCCTTCCTGAGTTGCAAAGTATAGCGGAAGAGTTAGGTATTAAAAAAGTAAGTTCCCTTAAGAAAGAGGAACTTGTATACAGAATTCTTGACGAACAGGCCATTTCATACGCCGGCATCCAGGCTGAAAAGGAGAAAGAAAAGGAAGCAAAGAAAGCAGAAAGGCAGACTAAGGCTAAGAAAACAAAAGCTGCGGCTCCGAAAGGCGCAAAAGCTGATGCCAAAACGAAAGTCGCTGCTCCCGCCACACCCGTTGAAGCTTCGGTAGAAGAGGTCGTTCCGGAAGCTCCGGAACAGCCCGAACGTAAAAGACGGACTCGTATTGACAAGAAAGAAAAAGTGGCCGCGGCTGTTGTTCCTGTCCAGAAAAACGAAGAGGCAGCCGTTTCCAAAAGTCCGGTTTCAGCCAATGCTCCTGTATCCGAAACTCTTGTCCAGGTAGCTGATGCTACGGCCGACGTCCCTGCCGAAACGGTAAAACCGGCAGCAAAGAAAGTGGTTAAGAAGACTGACAAGCCTGTAGAGAAACCGTTGCTTCCTCCTGTTGTCGTGGAATCGGATAACGGAGAGCTTCCGGCCGAAATCGCTCCCGAAGTAACGGAAGAACCGGCTGTCGTGGAAACTCCTGCCGCTTCGACTCCGGCAGACGAACCTAAACGTGTGGTATTCCGCCATCCGGACACCAAATCAGTTCTCGATCAACTTTTCCCATTCTCTTCCACACCTGCAAAACCGGAACCGAAAGCGCGGGAAGAACAACCTGCAGCCGCTCAGCAGCAGAACAATCCTCGCCAGAATAACAACAGACAGAACAACCAGAATAATCATAACAACCAGCGCAACAACAATAATAACAATGCTGTGCAGGAAAAACAGTATGAGTTTGACGGTATACTGACAGGTGTCGGTGTGCTGGAAATGATGCCTGACGGATATGGTTTCTTGCGTTCTTCCGATTATAACTACCTGACTTCCCCGGATGATATTTACGTATCGCAGTCGCAGATCAAGCTGTTCGGCCTGAAGACCGGCGACGTGGTGGAGGGGGCTATCCGTCCTCCGAAGGAAGGTGAAAAATATTTCCCGCTTGTCAAAGTGGACAAGATCAACGGCCGTACGCCTGAAGAAGTCCGTGACCGTGTTCCTTTCGATCATCTGACTCCGCTTTTCCCGGACGAAAAATTCATGTTGACGGCCCGCAAGTCTTCGAAAGTATATGATAATATCGCCGTACGTGTAGTAGATCTGTTCTCGCCGATCGGCAAGGGACAGCGTGGTCTGATCGTGGCACAGCCGAAGACCGGTAAGACGATGCTGTTGAAGGATATCGCCAATGCGATCGCAGCCAACCATCCTGAAGTGTATATGATTATCCTGCTGATCGACGAACGTCCTGAGGAGGTGACCGATATGGCCCGTAGCGTAGATGCCGAAGTGATTGCTTCTACTTTCGACGAACCGGCTGAACGCCATGTGAAAATTGCCGAAATCGTCTTGAATAAGGCTAAACGTATGGTGGAATGTGGACATGATGTCGTGATCCTGTTAGACTCTATCACACGTCTGGCTCGTGCTTACAATACGGTTCAGCCGGCTTCCGGTAAAGTGCTCTCCGGTGGTGTGGATGCGAACGCATTGCAGAAACCGAAACGTTTCTTCGGGGCTGCCCGTAACATCGAAAACGGCGGCAGCCTGACGATCCTGGCAACGGCATTGACTGAAACCGGTTCGAAGATGGACGATGTGATCTTTGAAGAATTCAAAGGTACGGGTAATATGGAATTGCAGTTGGATCGCAAGCTGGCAAACAAACGTGTTTATCCGGCTGTCGATATCACAGCGTCCAGCACGCGCCGCGACGACCTGTTGCAGGATGAAAACACCGTGAACCGTATGTGGATCCTGCGTAAGTACCTGGCCGATATGAACTCTATGGAGGCTATGGAATTTGTCAAGAAGCGCATGGAACAGACATTCGATAATATGGAGTTCCTGGCTTCGATGAACGGATAA
PROTEIN sequence
Length: 683
MQKYNILELNEKLLPELQSIAEELGIKKVSSLKKEELVYRILDEQAISYAGIQAEKEKEKEAKKAERQTKAKKTKAAAPKGAKADAKTKVAAPATPVEASVEEVVPEAPEQPERKRRTRIDKKEKVAAAVVPVQKNEEAAVSKSPVSANAPVSETLVQVADATADVPAETVKPAAKKVVKKTDKPVEKPLLPPVVVESDNGELPAEIAPEVTEEPAVVETPAASTPADEPKRVVFRHPDTKSVLDQLFPFSSTPAKPEPKAREEQPAAAQQQNNPRQNNNRQNNQNNHNNQRNNNNNNAVQEKQYEFDGILTGVGVLEMMPDGYGFLRSSDYNYLTSPDDIYVSQSQIKLFGLKTGDVVEGAIRPPKEGEKYFPLVKVDKINGRTPEEVRDRVPFDHLTPLFPDEKFMLTARKSSKVYDNIAVRVVDLFSPIGKGQRGLIVAQPKTGKTMLLKDIANAIAANHPEVYMIILLIDERPEEVTDMARSVDAEVIASTFDEPAERHVKIAEIVLNKAKRMVECGHDVVILLDSITRLARAYNTVQPASGKVLSGGVDANALQKPKRFFGAARNIENGGSLTILATALTETGSKMDDVIFEEFKGTGNMELQLDRKLANKRVYPAVDITASSTRRDDLLQDENTVNRMWILRKYLADMNSMEAMEFVKKRMEQTFDNMEFLASMNG*