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L3_122_000M1_scaffold_341_12

Organism: L3_122_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 18
Location: 13676..17029

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 1151.0
  • Bit_score: 1634
  • Evalue 0.0
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003199414 similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 1117.0
  • Bit_score: 2182
  • Evalue 0.0
transcription-repair coupling factor Mfd similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 1114.0
  • Bit_score: 1399
  • Evalue 0.0

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Taxonomy

Alistipes indistinctus → Alistipes → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3354
ATGACGATCGCCGAGCTGGAACAGATTTTCACCGATCAGCAGGCTTTCCGGCAACTGACCGAGAGCATCCGTCCGGGGAGTACGGTACAACTCGCGTCGCTGGTCGGATCGTCGCTGTCGCTCGTCGCGCACGGAGCGATCGCCCGTCTCGGAGGCGTCCACGTCCTGGTCGCCGAAGACCGGGATACGGCGGGCTATCTTTACAACGACCTCTATCCGCTCACGGGCGGAGAGGGGTTGTTTTTCTTTCCAACGGGCTACAAGCGCTCGATCCAGTACGGACAGGAGGACCCGTCGGGCCTCGTACAACGCACGACGGCGCTCAACGCACTGCGAAGCGCGGCGGACAAGCCGCTGATTCTGTGCACATATCCCGAGGCGCTGACCGAAAAAGTCGCCGACCGGGAGCGGCTGAGCGACAGCGTACTGAAGTTGCGCCGAGGGGACAATCTGTCGACCGCTTTCGTCGAGGAAGCGTTGCGGGAATGCCGTTTCGAACGGGTCGAGTTCGTCTACGAACCGGGACAATACTCGGTTCGCGGCGGCATCGTCGACATTTTCTCCTATTCGGACAACAAACCCTATCGGATCGACTTTTTCGGCGACGAGATCGACTCGATCCGGCCGTTCGACGTCGGCACGCAGCTCTCGACCGGCACGCTCGACGAGGTGGAGATCGTTCCGAACCTCAAGACGGTAACCTCGGTCGAGCATCGCGTCTCGCTGGCCCGGTTCGCGGGAGAAGTCACCTACTGGATCGCCGACGGAGACTACACGCTCAAGCGCTTCGACGACATCCGGACGAAGATTCTCGGCGATCTGGACGAGCCGTCGTCGATCGACACGCTGGTCACCAGCCGCAAAGGATTTCTCTCCGACGCGAAGAAGGCGGCTTTCGTGTTGTTGCGCGACAACGTCCGCGAGCGGCCCGCCGAAGTCCGCGTCGCGTTCGACACGACGCCCCAGCCCGAATTCAACAAGAAATTCGATCTGCTGGCCGACGACATCAACGCGAACCGTCTGAGAGGTTATTCGACCTGTCTGCTCTCCGACAACAAGGCTCAGATCGAGCGGCTGTCGAACATCTTCAACTCGATCGGAGAGAAGAACGTCGTCTTCGACTCCGTTCCTCTGGCACTGCACGCGGGGTTCGTCGACCATACGTCGAAAAACTGCTTCTACACCGATCACCAGATATTCGACCGCTACCAGCGTTACCGTATCCGGGGCGAGCTGGACCGGAGCGAAAGCCTGACGATTCAGGAGCTCAACTCGCTGAAAGTAGGCGATTACGTCGTGCACATCGACCACGGCGTCGGCCGCTTCGGGGGACTGACGCGGACGGTCGAGAACGGCAAGGTGCACGAGGCGATCAAGCTCGTCTACCGCGACAACGACGTGCTGCTGGTAAACGTCCACGCGCTGCACCGCATCTCGAAGTACAAGGACAAGGACAGCGAGCCGCCGAAGATATACAAGCTCGGCTCGGGGGCATGGCAGCGCATGAAGCTCAACACGAAAAAGGCCGTCAAGGACATCGCCCGCGAGCTGATCGCGCTGTACGCGAAGCGTCAGGCCAGCCGGGGCTTCGCCTTTTCGCCCGACAGCTACATGCAGCACGAGCTGGAAGCCTCGTTCATTTACGAGGACACGCCCGACCAGCAAACGGCCACGCAGCTCGTCAAGCAGGACATGGAAAGTCCCGTGCCGATGGACCGGCTGGTCTGCGGCGACGTCGGGTTCGGCAAGACCGAAATCGCGATCCGCGCGGCCTTCAAGGCCGTCACCGACTCGAAGCAGGTCGCCGTGCTGGTCCCCACGACCATCCTCGCACTGCAACACTACCGTACATTCAACGAGCGGCTGAAGGAGTTCCCCGTCCGCATCGAGCACCTGAGCCGCCTCAAAAGCGCGAAGGAGACGCGCCAGATTCTCGAAGAGGTCAAAAGCGGCAAAATCGACATCCTGATCGGCACGCACAAGATACTGGGCAAGGGCATCGAGTTCAAGGACCTCGGTCTGCTCGTGATCGACGAGGAGCAGAAGTTCGGCGTGGCGGCCAAGGAGAAGCTGCGCCAGTTGAGGGCCGAAATCGACACGCTGACGCTGACCGCCACGCCGATCCCCCGCACGCTGCAGTTTTCGCTGATGGGCTCGCGCGACCTGTCCGTCATCACGACTCCTCCGCCCAACCGCCAGCCCATAGCGACCGAGACGCATCCGTTCGACGAAGAGATCATCCGCGAGGCGATCGAGTTCGAGCTCGCGCGCGGCGGACAGGTATATTTCGTTCATAACCGGGTCGGAACGGTCGCCGACATCGAGGCGCTCGTTCGCAGGCTCTGTCCGCAGGCGCGGACGGCCGTAGGGCACGGACGGATGAACGCGCAGCAGATGGAGAAGCTGATGATGGACTTCATCTACGGCGAATTCGACGTGCTGATCGCCACGTCGATCATCGAGTCGGGCGTCGACGTGCCGAACGCCAACACGATCATCATCGACAACGCGCAGAACTTCGGGCTGAGCGACCTGCACCAGCTGCGCGGCCGCGTCGGACGGTCGAACCGCAAGGCTTTCTGCTACCTGCTCACCCCTCCCGAGGAGACGCTCTCGTCCGACGCCCGCCGGCGGCTGCGCGCCATCGAGGAGTTCTCGGACCTGGGCGCGGGGTTCAACATCGCGATGCAGGACATGGACATCCGGGGAGCGGGCAACCTGCTCGGCGGCGAACAGAGCGGCTTCATCGCCGACATCGGATTCGAGACCTACCAGAAAATCCTCGCCGAGGCGATCGCCGAGCTGCGCGAGGAGGAGCAGGCAACCGCCGCGCCGCAGGAAGGCAAGCCGCAGGAAGCACTTTCCCCGCAGGCAAGGCCCGCCGCCTTCATCACCGACTGCCAGATCGAGACCGACCGCGAGGCGTTCATTCCGGACAAGTACGTCGGCAGCAGCACGGAGAAGATCAGGCTCTACCGCGAGCTCGACAACATCGCCGACGAGGAGCGGCTGTCCGTCTTCGAGGCGAACCTGCGCGACCGTTTCGGCGAAATCCCCGCGCCGACCCGCGAGCTGTTCGACGTCGTGCGGATGCGCTGGGCCTGCATCCGTCTGGGCTTCGAGAAAGCGATCGTCAAAAACGGGATCATGATCCTGAAATTCATTGAGAACCAGCATTCGGCCTACTACAAGAGCGACTTGTTCGGCGGCATACTGAAAGCGGCTACGCGCGCAGAGAGCAAATTTATTTTCCGTCAGAACAATAATAAGCTCTCCGTGGTAGTTAGAAATATAAAAAATATCTCCGAGGCGACGGCCGCGCTGCACGAGCTGGCCGAAAAGGCCGCGCAGTAG
PROTEIN sequence
Length: 1118
MTIAELEQIFTDQQAFRQLTESIRPGSTVQLASLVGSSLSLVAHGAIARLGGVHVLVAEDRDTAGYLYNDLYPLTGGEGLFFFPTGYKRSIQYGQEDPSGLVQRTTALNALRSAADKPLILCTYPEALTEKVADRERLSDSVLKLRRGDNLSTAFVEEALRECRFERVEFVYEPGQYSVRGGIVDIFSYSDNKPYRIDFFGDEIDSIRPFDVGTQLSTGTLDEVEIVPNLKTVTSVEHRVSLARFAGEVTYWIADGDYTLKRFDDIRTKILGDLDEPSSIDTLVTSRKGFLSDAKKAAFVLLRDNVRERPAEVRVAFDTTPQPEFNKKFDLLADDINANRLRGYSTCLLSDNKAQIERLSNIFNSIGEKNVVFDSVPLALHAGFVDHTSKNCFYTDHQIFDRYQRYRIRGELDRSESLTIQELNSLKVGDYVVHIDHGVGRFGGLTRTVENGKVHEAIKLVYRDNDVLLVNVHALHRISKYKDKDSEPPKIYKLGSGAWQRMKLNTKKAVKDIARELIALYAKRQASRGFAFSPDSYMQHELEASFIYEDTPDQQTATQLVKQDMESPVPMDRLVCGDVGFGKTEIAIRAAFKAVTDSKQVAVLVPTTILALQHYRTFNERLKEFPVRIEHLSRLKSAKETRQILEEVKSGKIDILIGTHKILGKGIEFKDLGLLVIDEEQKFGVAAKEKLRQLRAEIDTLTLTATPIPRTLQFSLMGSRDLSVITTPPPNRQPIATETHPFDEEIIREAIEFELARGGQVYFVHNRVGTVADIEALVRRLCPQARTAVGHGRMNAQQMEKLMMDFIYGEFDVLIATSIIESGVDVPNANTIIIDNAQNFGLSDLHQLRGRVGRSNRKAFCYLLTPPEETLSSDARRRLRAIEEFSDLGAGFNIAMQDMDIRGAGNLLGGEQSGFIADIGFETYQKILAEAIAELREEEQATAAPQEGKPQEALSPQARPAAFITDCQIETDREAFIPDKYVGSSTEKIRLYRELDNIADEERLSVFEANLRDRFGEIPAPTRELFDVVRMRWACIRLGFEKAIVKNGIMILKFIENQHSAYYKSDLFGGILKAATRAESKFIFRQNNNKLSVVVRNIKNISEATAALHELAEKAAQ*