ggKbase home page

L3_122_000M1_scaffold_348_13

Organism: L3_122_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 18
Location: comp(16219..16797)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NW44_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 192.0
  • Bit_score: 378
  • Evalue 2.50e-102
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDF16298.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 192.0
  • Bit_score: 378
  • Evalue 3.50e-102
putative ECF-type RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 181.0
  • Bit_score: 216
  • Evalue 3.60e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bacteroides sp. CAG:98 → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGACTATTGCAACAAAGGAAATAAATCGAATGGAAAGGCTTGATTTTTCAGAGATCTATGCTGTTTATTTTCCACGAATGTTGCGTTTTGCCTGTACTTATGTCATCGATAAGGAAGAGGCAGAAAATATAGTACAGGATGTTTTTATCTACTTATGGGAGCATCGCTCTTTATTGGATGGTCTTCGTTGTCCTCAAGCTTTTCTTTTTACTTTGGTCAAACGGCGCAGCATTGATTTTTTGCGTAAAAAAATATCAGTTGTTGAACAAAGAAGTAGTTTGGAAGAAGTAGAGAATCGTGAAATACAATACAAGCTTTATTCTTTGGAGGCTTTTGATGAAACTAAATTCTCTGATGAGGATGTTGAACGCATTTTGCATGAAGCGATTAATCGTTTACCTGAACAATGTCGCCGTATCTTTATTGAAAGTAAATTGAATAATAAGAAGTATCAGGATATAGCCGATGAAATGGGCTTGTCTTTGCAAACTGTTAAGAATCAGGTGATGATAGCTGTCAGGAAGTTGCGTGAAGACTTGAAAGATTGTTTACCTCTATTGGTCTTTTTGTTGGGGTGA
PROTEIN sequence
Length: 193
MTIATKEINRMERLDFSEIYAVYFPRMLRFACTYVIDKEEAENIVQDVFIYLWEHRSLLDGLRCPQAFLFTLVKRRSIDFLRKKISVVEQRSSLEEVENREIQYKLYSLEAFDETKFSDEDVERILHEAINRLPEQCRRIFIESKLNNKKYQDIADEMGLSLQTVKNQVMIAVRKLREDLKDCLPLLVFLLG*