ggKbase home page

L3_122_000M1_scaffold_3214_10

Organism: L3_122_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 18
Location: 5985..9797

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1270.0
  • Bit_score: 2509
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3Q4_BACPM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1270.0
  • Bit_score: 2509
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 1270.0
  • Bit_score: 2456
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bacteroides plebeius → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3813
ATGTCTTCAGAAACTCAAAATCAACGAATTAATTTTGCTTCTATTAAGAATCCGATGCAGTATCCGGATTTCCTGGAAGTACAGTTGAAGTCATTTCAGGACTTCTTGCAATTAGATACCCCACCCGAAAAACGAAAGAATGATGGCTTGTATAAGGTTTTTGCGGAAAACTTCCCTATAGCTGATACACGCAATAACTTCGTGCTCGAGTTCCTTGACTACTATATTGATCCGCCTCACTATACAATTGATGATTGTTTGGAACGTGGCTTGACATATAGTGTACCTTTGAAAGCTAAATTGAAGCTTTATTGTACCGACCCCGATCACGAAGATTTTGATACAGTGATTCAGGATGTGTATCTGGGACCAATTCCTTATATGACTCCGAAAGGCACCTTTGTAATTAATGGTGCTGAACGTGTAGTTGTTTCTCAGCTGCACCGTTCTCCGGGTGTATTCTTTGGTCAGAGCATCCATGCCAATGGTACCAAATTGTATTCGGCTCGTATTATCCCGTTTAAAGGATCTTGGATTGAGTTCGCTACGGATATCAACAATGTGATGTATGCGTACATCGACCGTAAGAAGAAGCTTCCGGTAACAACTTTGTTGAGAGCTGTAGGATTTGAAAATGATAAGGATATTCTTGAAATTTTCAATCTGGCTGAGGATGTAAAGGTTAACAAAACTAACCTGAAAAAGATTATTGGACGCAAATTGGCTGCTCGTGTATTGAAAACATGGACAGAAGATTTTGTGGATGAAGATACTGGTGAAGTTGTTTCTATCGAACGTAACGAGGTAGTAATTGACCGTGAAACTGTCATTGAACCTGAACATATCGACTTGATTATCGAGTCTGGTGTACAGAATATCCTCGTTCACAACGAAGAAGCAAATGCCTCTGACTATTCTATTATCTTCAATACTTTACAGAAAGACCCAAGTAACTCTGAAAAGGAAGCTGTATTGTATATCTATCGCCAGCTGCGTAATGCAGACCCTGCTGATGATGCAAGTGCACGCGAAGTTATCAACAACTTGTTCTTCTCAGAAAAACGTTATGACTTGGGTGATGTAGGACGTTATCGTATCAACAAGAAGTTGAACCTGGATACTCCTATGGATGTCAGAGTATTGACGAAACAAGATATTATCGAGATTATTAAATATCTCATTGAGTTGATTAACTCAAAGGCTGATGTGGATGATATTGACCACTTGAGTAACCGTCGTGTACGTACAGTGGGTGAACAGTTGTCTAATCAGTTTGCAATTGGTCTGGCTCGTATGTCACGTACAATCCGTGAACGTATGAACGTACGCGACAACGAAGTATTTACTCCGATTGATTTGATTAACGCGAAAACTATTTCGTCTGTAATCAACTCATTCTTTGGAACGAATGCTTTGTCACAGTTCATGGACCAGACTAACCCGTTGGCTGAAATTACGCATAAGCGTCGTTTGTCAGCTTTGGGACCTGGTGGTTTGTCACGTGACCGTGCTGGTTTCGAGGTTCGAGACGTACACTATACTCACTATGGTCGTTTGTGTCCGATTGAAACTCCTGAAGGTCCGAACATCGGTTTGATTTCTTCTTTGTGTGTTTACGCAAAGATTAATGAACTGGGCTTTATTGTTACTCCTTACCGTAAAGTAAAAGATGGAGTAGTAGACTTGTCAAATGAAGGTATTGAATACCTTTCTGCAGAAGAAGAAGAAGACAAGATTATCGCTCAGGGTAATGCTCCACTGAATGATGACGGTACATTTATCCGTGAAAAGGTAAAAGCGCGTCGTGATGCGGATTATCCGGTAGTTACTCCGGACCAGGTAGAATTGATGGACGTAGCTCCTCAGCAGATTGCATCTATTGCGGCTTCATTGATTCCGTTCCTTGAACATGACGATGCGAACCGTGCGTTGATGGGATCTAACATGATGCGCCAGGCAGTTCCTTTGTTGAAGACTGAAGCTCCGATTGTAGGTACAGGTATCGAAAAACAATTGTGTGAAGATTCACGTACACAGATTGCTGCAGAAGGTGATGGTGTGATTGACTTTGTGGATGCTACTACAATTCGTATTTTGTATGACCGTACAGAAGATGAAGAATTTGTAAGCTTCGAACCGGCATTGAAGGAATATCGTATTCCGAAGTTCCGTAAGACAAACCAGAGCATGACCATCGACTTGCGTCCGATTTGTAATAAAGGACAGCGCGTGAAGAAGGGAGATATCCTGACTGAAGGTTATTCTACTGCAAATGGAGAGCTGGCATTGGGTAAGAACCTGCTGGTAGCTTACATGCCTTGGAAGGGTTACAACTATGAGGATGCTATTGTATTGAACGAACGTGTGGTTCGTGAAGATATTCTGACATCTGTTCACGTAGATGAATATATTCTGGAAGTACGCGAAACCAAACGCGGAATGGAGGAATTGACTTCTGATATTCCGAATGTAAGCGAAGAAGCAACTAAAGATTTGGATGAAAACGGTATCGTACGTATTGGTGCACGTATTGAGCCGGGCGATATCCTGATTGGTAAGATTACTCCGAAGGGAGAATCTGATCCTTCTCCAGAAGAAAAACTGTTGCGTGCTATCTTTGGTGACAAGGCTGGAGATGTGAAGGATGCTTCATTGAAAGCTTCTCCATCATTGCGCGGTGTGGTTATTGACAAGAAATTATATTCTCGTGTAATCAAGACTCGTAGCGAGAAAAATGCAGATAAGGCTATTCTGCCGAAACTGAATGAAGAATTTGAAGAAAAAGCTGCAGCTCTGAAAGCAATCTTGATTGACAAGTTGCTGGTATTGACAGCTGATAAGGTTTCTCAGGGTGTGAAGGATTATCTGGGAACTGAAGTGATTGCTAAGGGAGCTAAGTTTACTAAATACGATTTGGAATCATTGGATTATACTGTAATTCAGTTGAGCAAGTGGACTGCTGATGCTCATAAGAATGATATGATTCGTGATCTTATCGTAAACTATCTGAAGAAGTACAAGGAACTGGATGCTGAATTGAAACGTAAGAAGTTTGCGTTGACAATCGGTGATGAGTTGCCTTCAGGTATTATTCAGATGGCGAAGGTTTACATTGCTAAGAAACGTAAGATTGGTGTGGGTGATAAGATGGCCGGTCGTCACGGTAACAAGGGTATCGTTTCACGCGTGGTTCGTCAGGAAGATATGCCGTTCTTGGCTGACGGTACACCGGTTGATATCGTATTGAACCCGTTGGGTGTGCCTTCTCGTATGAACATCGGTCAGATTTTCGAAGCCGTACTGGGACGCGCTGGAAAAGAATTGGGTGTGAAGTTTGCGACTCCGATTTTCGATGGTGCTACTTTGGATGACTTGGATGAATGGACTGACAAAGCTGGTCTGCCACGCTATTGTAAGACTTACTTGTATGATGGTGGTACAGGTGATCAGTTTGACCAGCCGGCTACAGTCGGTGTGACTTACATGTTGAAACTGGGTCACATGGTTGAAGACAAAATGCATGCCCGTTCAATCGGTCCGTACTCATTGATTACTCAACAGCCGCTTGGTGGTAAGGCTCAGTTCGGTGGTCAGCGTTTCGGAGAAATGGAGGTTTGGGCAATCGAAGCATTCGGTGCTGCTCATGTACTTCAGGAAATCTTGACTATCAAGTCTGATGATGTAGTAGGACGTTCTAAGGCATACGAAGCAATTGTGAAAGGTGAACCTATGCCGACTCCGGGTATTCCTGAATCTCTCAACGTATTGTTGCATGAACTTAGAGGTTTGTGCTTGAGCATTACGCTGGAATAA
PROTEIN sequence
Length: 1271
MSSETQNQRINFASIKNPMQYPDFLEVQLKSFQDFLQLDTPPEKRKNDGLYKVFAENFPIADTRNNFVLEFLDYYIDPPHYTIDDCLERGLTYSVPLKAKLKLYCTDPDHEDFDTVIQDVYLGPIPYMTPKGTFVINGAERVVVSQLHRSPGVFFGQSIHANGTKLYSARIIPFKGSWIEFATDINNVMYAYIDRKKKLPVTTLLRAVGFENDKDILEIFNLAEDVKVNKTNLKKIIGRKLAARVLKTWTEDFVDEDTGEVVSIERNEVVIDRETVIEPEHIDLIIESGVQNILVHNEEANASDYSIIFNTLQKDPSNSEKEAVLYIYRQLRNADPADDASAREVINNLFFSEKRYDLGDVGRYRINKKLNLDTPMDVRVLTKQDIIEIIKYLIELINSKADVDDIDHLSNRRVRTVGEQLSNQFAIGLARMSRTIRERMNVRDNEVFTPIDLINAKTISSVINSFFGTNALSQFMDQTNPLAEITHKRRLSALGPGGLSRDRAGFEVRDVHYTHYGRLCPIETPEGPNIGLISSLCVYAKINELGFIVTPYRKVKDGVVDLSNEGIEYLSAEEEEDKIIAQGNAPLNDDGTFIREKVKARRDADYPVVTPDQVELMDVAPQQIASIAASLIPFLEHDDANRALMGSNMMRQAVPLLKTEAPIVGTGIEKQLCEDSRTQIAAEGDGVIDFVDATTIRILYDRTEDEEFVSFEPALKEYRIPKFRKTNQSMTIDLRPICNKGQRVKKGDILTEGYSTANGELALGKNLLVAYMPWKGYNYEDAIVLNERVVREDILTSVHVDEYILEVRETKRGMEELTSDIPNVSEEATKDLDENGIVRIGARIEPGDILIGKITPKGESDPSPEEKLLRAIFGDKAGDVKDASLKASPSLRGVVIDKKLYSRVIKTRSEKNADKAILPKLNEEFEEKAAALKAILIDKLLVLTADKVSQGVKDYLGTEVIAKGAKFTKYDLESLDYTVIQLSKWTADAHKNDMIRDLIVNYLKKYKELDAELKRKKFALTIGDELPSGIIQMAKVYIAKKRKIGVGDKMAGRHGNKGIVSRVVRQEDMPFLADGTPVDIVLNPLGVPSRMNIGQIFEAVLGRAGKELGVKFATPIFDGATLDDLDEWTDKAGLPRYCKTYLYDGGTGDQFDQPATVGVTYMLKLGHMVEDKMHARSIGPYSLITQQPLGGKAQFGGQRFGEMEVWAIEAFGAAHVLQEILTIKSDDVVGRSKAYEAIVKGEPMPTPGIPESLNVLLHELRGLCLSITLE*