ggKbase home page

L3_122_031G1_scaffold_5_23

Organism: L3_122_031G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 17
Location: 31964..32725

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=10 Tax=Clostridium perfringens RepID=H7CY74_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 251.0
  • Bit_score: 487
  • Evalue 5.10e-135
sigF; sporulation sigma factor SigF similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 251.0
  • Bit_score: 487
  • Evalue 1.40e-135
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 251.0
  • Bit_score: 487
  • Evalue 7.10e-135

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 762
ATGGATATAAGTAGTATTGAGAAAGATAATTTTAATTATGACAAAAATACAACTCTCATAGTCATGGCTAAAGAGGGAAATAAGGAGGCAATGAATAAGCTTATAGAAGTTAATACTCCTTTAGTCTCTTCAATATGCAAGAGATTTACAAATAGAGGGTATGACTATGAGGATATATTTCAGATTGGGTCAATGGGATTAGTTAAAGCTATAAACAACTTTAATGATAGTTTTAATGTTAAATTTTCAACTTATGCTGTGCCTATGATTATAGGTGAAATAAAGAGATTCTTAAGGGATGATGGAATAATAAAGGTAAGTAGAAGCACTAAGACTTTAGCTAAAAAGCTTCATTACAATAAGGAAGAACTAATAAAAAAATTAAATAGGGATCCTACTGTAGATGAATTAGCTGAATACTCTGGTGTTGATAAGGAAGAGGTAATAGTAGCCTTAGAATCAGCAAGTAGTATGCAATATCTATATGATACTATACACCATGATGAAGGAACGCCGGTTCTCTTAATAGATAAACTTAGTGAGAAGGGTGAAGATGATGACATGGTCAATAAAATAGCTTTAAGAGAGGCTATTAGTTCATTAGATTCAAAGGGTAAGCAAATCATAATGCTTAGGTATTTCAAGGATAAAACTCAAATTCAAGTTGCAAAAATGCTTGGTATAAGTCAAGTTCAAGTTTCTAGAATAGAGAAAAAGGTACTAAAAATTATGAAAGAAAAATTAGAAGAGGATTGATTATAA
PROTEIN sequence
Length: 254
MDISSIEKDNFNYDKNTTLIVMAKEGNKEAMNKLIEVNTPLVSSICKRFTNRGYDYEDIFQIGSMGLVKAINNFNDSFNVKFSTYAVPMIIGEIKRFLRDDGIIKVSRSTKTLAKKLHYNKEELIKKLNRDPTVDELAEYSGVDKEEVIVALESASSMQYLYDTIHHDEGTPVLLIDKLSEKGEDDDMVNKIALREAISSLDSKGKQIIMLRYFKDKTQIQVAKMLGISQVQVSRIEKKVLKIMKEKLEED*L*