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L3_128_000G1_scaffold_60_10

Organism: L3_128_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: 13076..14422

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F852_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 448.0
  • Bit_score: 855
  • Evalue 1.30e-245
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 448.0
  • Bit_score: 855
  • Evalue 1.80e-245
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 449.0
  • Bit_score: 679
  • Evalue 4.60e-193

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Taxonomy

Collinsella intestinalis → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1347
GTGCCGAAAAAGTCTGCAAGCACCGGTTCCGCTCTGGACGCAACCATCGAGAAGCTGCTCGACCTGGGATCCAAGGCCGGTTCCGTCACCGAGGATGAGATCCAGATCGTCCTCAAGAACGTCGACGTCACTGATGCACAGCTGTCCTCCATTTACCGGTTCCTTCGCGACCGCGGCGTCGAGATCGTCTCGGCCACCGAGGATGACGACTCCGAGCTGATCGTGGATGACGATGACCGCGACGTGTCGCACGATGACGACGACCTCGACGGTGACGAGAGCGACGAGGACCATGACCTCAAGATGGCCCGTCAGGCCGATGCCGAGATGGCCTCGACCAAATCCAAGAAGAAGGCCCGCACCGTCCGCACCACGCGCAGCCGTTCCCGAGCCCGCGGCATCGACGCCTCCACGGTCATGCTCACCGGCGACCCGGTGCGCATGTACCTCAAGGAGATCGGCAAGGTCGACCTGCTGACCGCTGCCGAGGAGGTCGACCTCGCCATGAAGATCGAGGCCGGTCTCGACGCCGCCGATAAGCTGGAGAAGCAGGAGGCCGGCGAAATTGAGCTGACCCGCGCCGAGATGCGTCGTCTCATGCGCGTCGAGCAGGTCGGCCTCGATGCCAAGCAGGCCCTTATCTCCGCCAACCTGCGTCTTGTCGTTTCCATCGCCAAGCGCTACGTCGGTCGCGGCATGCTCTTCCTGGACCTCATCCAGGAGGGCAACCTCGGTCTCATCCGCGCGGTCGAGAAGTTCGACTACGAGAAGGGCTTCAAGTTCTCCACGTACGCCACGTGGTGGATCCGTCAGGCCATTACTCGCGCCATCGCCGACCAGGCCCGCACCATCCGTATCCCGGTCCACATGGTCGAGACCATCAACAAACTTGTGCGCGTGCAGCGCCAGCTGCTTCAGGACCTCGGCCGCGACCCGACCCCGGAGGAGATCGGTGCCGAGATGGATATGAGCGCCGACCGCGTGCGCGAGATCCAAAAGATCTCCCAGGAGCCGGTGTCCCTCGAGACGCCCATCGGCGAGGAGGAGGACTCCCAGCTGGGCGACTTCATCGAGGACGCGCAGGCTGTCGTCCCCGCGGACGCCGCCAGCTTCTCGATGCTGCAGGAGCAGCTCACGCAGGTTCTCGATGGACTTGCGGAGCGCGAGCGCAAGGTTATCGAGCTGCGCTTCGGCCTTGAGGACGGTCATCCCCGTACGCTCGAGGAGGTTGGACGCGAGTTTGGCGTGACGCGCGAGCGCATCCGCCAGATCGAGTCCAAGACGCTGGCCAAGCTGCGCCACCCCAGCCGTTCGAGCAAGCTCAAGGATTATCTCGAGAACTGCTAA
PROTEIN sequence
Length: 449
VPKKSASTGSALDATIEKLLDLGSKAGSVTEDEIQIVLKNVDVTDAQLSSIYRFLRDRGVEIVSATEDDDSELIVDDDDRDVSHDDDDLDGDESDEDHDLKMARQADAEMASTKSKKKARTVRTTRSRSRARGIDASTVMLTGDPVRMYLKEIGKVDLLTAAEEVDLAMKIEAGLDAADKLEKQEAGEIELTRAEMRRLMRVEQVGLDAKQALISANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIRAVEKFDYEKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVRVQRQLLQDLGRDPTPEEIGAEMDMSADRVREIQKISQEPVSLETPIGEEEDSQLGDFIEDAQAVVPADAASFSMLQEQLTQVLDGLAERERKVIELRFGLEDGHPRTLEEVGREFGVTRERIRQIESKTLAKLRHPSRSSKLKDYLENC*