ggKbase home page

L3_128_000G1_scaffold_26583_1

Organism: L3_128_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(3..491)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcriptional regulator/sensory box protein n=2 Tax=Clostridium perfringens RepID=B1RPJ7_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 318
  • Evalue 3.40e-84
sigma-54 dependent transcriptional regulator/sensory box protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 318
  • Evalue 9.70e-85
Sigma-54 dependent transcriptional regulator/sensory box protein {ECO:0000313|EMBL:EDT16051.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 318
  • Evalue 4.80e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 489
ATGCTTAGTAATTTAAAAAAGTATGGCTCAACTCTTCATATAAATAACAGAGTTGGCTTAGTAAATAGCTCTCCTCTTTTCATAAACGATAAGATTATAGGGGCTGTAAGTGTTATTCAGGATGTATCTGATATTATAGGTATGAAAGAAATAAATGAGAAATTTACTAAGATACTTGAAAACTCACAGGATATGATTTGCTTTGTAGATGAGAATGGCATAATAAATTATTTAAACCCTGCATATATTAAAAACTTTTCTAAAGTTAGTTCTGATGTTATAGGAAAAAGTATTTTTGATATTGCTCCTAATGGACTTAGAGCTAAAGTATTTAAAGAAAAAACTTTATTAAAAGATGTAATTCATAAGAAAAACGGTATAAATGTTATAAGTACTATTGATCCTTTATTTATTGATGGACAGTTTAAAGGAGTTATTTCTACTTCTAGACCAGTTAGTTTGATTAAAGAACTTATGTCAAAACTAAAT
PROTEIN sequence
Length: 163
MLSNLKKYGSTLHINNRVGLVNSSPLFINDKIIGAVSVIQDVSDIIGMKEINEKFTKILENSQDMICFVDENGIINYLNPAYIKNFSKVSSDVIGKSIFDIAPNGLRAKVFKEKTLLKDVIHKKNGINVISTIDPLFIDGQFKGVISTSRPVSLIKELMSKLN