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L3_128_015G1_scaffold_3457_1

Organism: L3_128_015G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 1..246

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 81.0
  • Bit_score: 165
  • Evalue 2.60e-38
tRNA pseudouridine synthase A n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XWT4_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 81.0
  • Bit_score: 165
  • Evalue 1.80e-38
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 81.0
  • Bit_score: 160
  • Evalue 1.30e-37

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Taxonomy

Bifidobacterium pseudocatenulatum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 246
TGCTTCACCATCGTCGCCGACGCATTCGCACGCAATATGGTGCGTTCGTTGGTTAACGGTTGCGTACAGGTTGGTATCGGCAAACGTTCCTTGGATTGGTTCGCCGGAAAAATGGCGACGCCGTTGCGTGAAGGCAGCACTGGCCCGATCGCTCCGCAAGGATTGACGCTCGAACATATCGAATATCCGGAAGACGACCAGTTGGCGATTCGTGCCGAAGCGATTCGTGCGAAACGTACTTTGTAA
PROTEIN sequence
Length: 82
CFTIVADAFARNMVRSLVNGCVQVGIGKRSLDWFAGKMATPLREGSTGPIAPQGLTLEHIEYPEDDQLAIRAEAIRAKRTL*