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L3_128_020G1_scaffold_102_8

Organism: L3_128_020G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 14
Location: 4035..7739

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1234.0
  • Bit_score: 2442
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 1234.0
  • Bit_score: 2442
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=5 Tax=Clostridium perfringens RepID=RPOB_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1234.0
  • Bit_score: 2442
  • Evalue 0.0

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3705
ATGGTACATCCTGTCCAAGTTGGAAAAAGAACGAGAATGAGCTTTGCAAAAGTCAAAGACGTGGCTGAAATGCCAAACCTAATTGAAATTCAATTAGATTCTTACAAATGGTTTTTAGATGCAGGACTTTATGAAGTTTTTGATGATATTAATCCTATCTCAAACTTTACTGGAAATCTTGTACTTGAGTTTGTAGGGTACACTCTAGATATGGATAACATAAAATATTCAGTTGAAGAGTGTAAAGAAAGAGACACTACTTATGCTGCACCGCTAAAAGTAGCTGTAAGACTTCAAAACAAAGAAACTGGAGAAATAAAAGAACAAGAGGTATTTATGGGAGATTTCCCATTAATGACAGAGCAAGGAACTTTTATAATCAATGGTGCCGAAAGAGTTATTGTTTCTCAGTTAGTAAGATCACCAGGTGTTTACTACAATTATAATGTAGATAAAACTGGTAAAAAACTGTTCTCTGCAACAGTAATACCTAACAGAGGTGCATGGTTAGAGTATGAAACAGATTCAAATGATGTTATCTATGTAAGAATAGATAAAACAAGAAAACTTCCTATAAGTATACTAGGAAGAGCTATGGGCTTTGGAAGCGATCAAGAACTTCTTGAGTATTTCGGTGAAGAAGAAAGATTCAAAGCTACAATAGAAAAAGATAATACTAAGACTAAAGAAGAAGCATTATTAGAAATCTATAAGAGATTAAGACCAGGTGAACCACCTACAGTTGATAGTGCAATTAGTTTAATAGATTCTTTATTCTTCGATGCTAAGAGATACGACTTATCAAGAGTTGGTAGATACAAGTTTAACAAAAAACTTGCAATTGGTTTAAGAATAGCTAACCAAATAGCAGCAGAAGATATAGTAGATAAATTAACTGGCGAAGTTTTAGTTGCAAAAGGTGAAAAAATATCAAGAGCTAATGCTGAAGAAATCCAAAATAGAGGAATAAATTCAGTTGATGTTTTAGTTGAAGACAGAGTAATTAGAATTATTGGTAACCACTTTGTAGATATACATAAGTGTGTGGACTTCGATATATCAGATTTAAATATCAGAGAATTAGTTCACTACCCAACATTAAGAGAGATCTTAGATAACTATTCTGATGAAGAAACTATAAAAGAAGAAATCAAAAAGAATATGACAAGACTTATTCCTAAGCATATCATCAAAGATGATATATTCGCTACAATAAGTTACCAAATTGGCTTAGCTTATAATATTGGATATGTTGATGATATAGACCACTTAGGAAACAGAAGATTAAGAAGTGTTGGTGAGCTTTTACAAAATCAATTTAGAATTGGTTTATCAAGAATGGAAAGAGTAGTTAAAGAGAGAATGACTATTCAAGACCAAGAAGCTATAACACCACAACAATTAATCAATATAAGACCAGTAGCAGCAGCTATAAAAGAGTTCTTTGGAAGCTCACAGTTATCACAGTTCATGGATCAAACAAACCCATTATCTGAGTTAACTCATAAGAGAAGATTATCAGCTCTTGGACCAGGAGGTCTTTCAAGAGAAAGAGCTGGTTTCGAAGTTAGAGACGTTCACCACTCTCATTATGGTAGAATGTGTCCTATCGAGACTCCAGAGGGACCAAACATAGGTCTTATAAACTCATTAGCTACATATGCTAAAGTTAATGAGTATGGCTTTATTGAAACTCCTTATAGAGTTGTAGATAAAGCAGAAGGTAGAGTAACTGGTGAAATAAGATACTTTACTGCAGATGAGGAAGACCAATACCTAGTAGCTCAGGCTAATGAACCATTAGACGAAAATGGATGCTTTATTGATAAGAAAGTAACTGTTAGAGATAAAGGTGAGGTATTAGTAGTTCCAAGTAAGGATGTTGACTTAATGGACGTTTCTCCAAGACAGCTAGTATCTGTTGCAACAGCAATGATACCTTTCTTAGAGAACGACGACGCATCAAGAGCCCTAATGGGATCAAACATGCAACGTCAAGCAGTTCCTTTATTAAAACCATATGCTCCAATAGTTGGTACTGGAATAGAATACAAAGCAGCTGTAGATTCAGGGGTTCTTCCTAAAGCTAAAAATGCTGGTGAAGTAGTTTATGTAAGTGCTAACGAAGTAAGAGTTAAGAGAGAATTAGATGGTGGTGTTGATACTTATAGACTTCTTAAATTCAAGAGAAGTAACCAAGGTACTTGTATAAACCAAAGACCAATAGTGGCTAAGGGTGACTGGGTACTTAAAGGTGAAGTATTAGCAGATGGACCTTCAACTGATTTAGGAGAAATAGCTTTAGGTAAAAACATAAGAATGGGATTCATTACTTGGGAAGGATATAACTACGAGGATGCTATGCTTATCTCAGAAGAGTTAGTTAGAGAAGACGTATTTACATCAATCCATATAGAAGAATATGAATGCGAAGCTAGAGACACTAAATTAGGACCAGAAGAAATAACTAGAGATATTCCAAACGTAAGTGAGGATGCTTTAAAAGATATAGATGAAAGAGGTATAATCAGAATCGGTGCTGAGGTAAGATCAGGAGATATTCTTGTTGGTAAAGTAACACCAAAAGGAGAAACTGAACTTACTGCTGAGGAAAGATTATTAAGAGCTATCTTCGGTGAAAAAGCTAGAGAAGTTAGAGATACTTCTTTAAGAGTTCCACACGGGGAAGCTGGTATAATAGTAGATGTAAAAGTATTTACAAGAGAAAATGGTGATGATTTATCACCAGGAGTTAATGAACTTGTAAGATGTTACATTGCTCAAAAGAGAAAAATATCTGTTGGAGATAAGATGGCTGGTCGTCACGGTAACAAAGGGGTTATCTCAAGAGTATTACCAGAAGAAGATATGCCATTCTTACCAGATGGTAGACCACTTCAAATATGCTTAAACCCACTAGGGGTTCCATCTCGTATGAACATCGGTCAGGTATTAGAGGTTCACTTAGGATGGGCTGCAAGTGCATTAGGATGGCATATTGCTACACCAGTATTTGATGGTGCTACAGAAACTGATATAGAAGATTGCTTAGAAAAAGCAGGATACAATAGAAACGGAAAAACAGTTTTAAGAGATGGTAGAACTGGTGAAGAGTTTGATAACGAAGTAACAGTTGGTATAATGTACATCTTAAAACTTGCTCACTTAGTTGATGATAAGATCCATGCTAGATCAACAGGACCTTACTCATTAGTAACTCAACAGCCACTTGGTGGTAAGGCACAATTCGGAGGACAAAGATTCGGAGAGATGGAGGTTTGGGCATTAGAAGCATACGGTGCTGCTCATACTCTTCAAGAAATACTTACTGTTAAGTCAGATGATGTTGTAGGTAGAGTTAAAACTTACGAAGCTATTGTTAAAGGTGAAAACATTCCTGAACCAGGAGTGCCAGAATCATTTAAGGTTCTTATTAAAGAACTTCAAGCTTTATGCTTAGACGTTAAAGTTTTAAATGATAATAACCAAGAAGTTAAATTCAAAGAATTAGCTGAAGATGATGATGAAATCGAAGTATTAGAAGTTAACATGGAAGGTACTGAAGATTCAACAACAGAAGAAGCTAAAGAGGAAAAAGGGGAAGCATACATCCCAGCAGAAGAAATTGATGAAGAAATAGACTATGAAAACATAGACTTATTAGACTTCACAAGTGATTTAGACATAGAAGATGATTTTAACTAG
PROTEIN sequence
Length: 1235
MVHPVQVGKRTRMSFAKVKDVAEMPNLIEIQLDSYKWFLDAGLYEVFDDINPISNFTGNLVLEFVGYTLDMDNIKYSVEECKERDTTYAAPLKVAVRLQNKETGEIKEQEVFMGDFPLMTEQGTFIINGAERVIVSQLVRSPGVYYNYNVDKTGKKLFSATVIPNRGAWLEYETDSNDVIYVRIDKTRKLPISILGRAMGFGSDQELLEYFGEEERFKATIEKDNTKTKEEALLEIYKRLRPGEPPTVDSAISLIDSLFFDAKRYDLSRVGRYKFNKKLAIGLRIANQIAAEDIVDKLTGEVLVAKGEKISRANAEEIQNRGINSVDVLVEDRVIRIIGNHFVDIHKCVDFDISDLNIRELVHYPTLREILDNYSDEETIKEEIKKNMTRLIPKHIIKDDIFATISYQIGLAYNIGYVDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVKERMTIQDQEAITPQQLINIRPVAAAIKEFFGSSQLSQFMDQTNPLSELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLATYAKVNEYGFIETPYRVVDKAEGRVTGEIRYFTADEEDQYLVAQANEPLDENGCFIDKKVTVRDKGEVLVVPSKDVDLMDVSPRQLVSVATAMIPFLENDDASRALMGSNMQRQAVPLLKPYAPIVGTGIEYKAAVDSGVLPKAKNAGEVVYVSANEVRVKRELDGGVDTYRLLKFKRSNQGTCINQRPIVAKGDWVLKGEVLADGPSTDLGEIALGKNIRMGFITWEGYNYEDAMLISEELVREDVFTSIHIEEYECEARDTKLGPEEITRDIPNVSEDALKDIDERGIIRIGAEVRSGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGEAGIIVDVKVFTRENGDDLSPGVNELVRCYIAQKRKISVGDKMAGRHGNKGVISRVLPEEDMPFLPDGRPLQICLNPLGVPSRMNIGQVLEVHLGWAASALGWHIATPVFDGATETDIEDCLEKAGYNRNGKTVLRDGRTGEEFDNEVTVGIMYILKLAHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGVPESFKVLIKELQALCLDVKVLNDNNQEVKFKELAEDDDEIEVLEVNMEGTEDSTTEEAKEEKGEAYIPAEEIDEEIDYENIDLLDFTSDLDIEDDFN*