ggKbase home page

L3_128_020G1_scaffold_102_9

Organism: L3_128_020G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 14
Location: 7819..11355

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1178.0
  • Bit_score: 2322
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 1178.0
  • Bit_score: 2322
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=10 Tax=Clostridium perfringens RepID=RPOC_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1178.0
  • Bit_score: 2322
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3537
TTGTTCGAATTAAATAATTTTGATGCTTTACAAATCGGGTTAGCATCTCCAGAACAAATTAGAGAGTGGTCTAGAGGAGAAGTAAAGAAACCTGAAACTATTAACTATAGAACGTTAAAACCTGAGAGAGACGGATTATTCTGTGAAAGAATATTCGGACCTATAAAAGACTGGGAATGTCACTGTGGAAAATACAAAAGAGTTAGATATAAAGGTATTGTATGTGACAGATGTGGTGTTGAAGTAACTAAATCTAAAGTTAGAAGAGAGAGAATGGCTCACATTGAATTAGCTGCGCCAGTATCTCATATATGGTATTTTAAAGGAATACCTTCAAGAATGGGATTAATCCTTGATATGTCACCAAGAGCTTTAGAAAAAGTTCTATATTTTGCATCATATATAGTTATAGATCCAAAAGAAACTTCATTATTAAAGAAACAACTTCTTAATGAGAAAGAATATAGAGAAGCGTGTGACAAATATGGTGAAGAGAGCTTTGTAGCTGGAATGGGTGCAGAAGCTATAAAAACTTTATTATCAGAAATAGACTTAGAAAGAACTGCTGCTGAGCTTAAAGAAGAATTAAAGCAAAGCACAGGTCAAAAGAAAGTTAGAATAATAAGAAGATTAGAAGTTGTAGAATCATTCAAATCATCAGGAAATAAACCTGAATGGATGGTAGTAGATGTAATACCAGTTATACCACCTGATTTAAGACCTATGGTTCAATTAGATGGAGGTAGATTTGCTACTTCAGATTTAAATGATTTATACAGAAGAGTTATAAATAGAAATAACAGACTTAAGAAGTTATTAGATCTTGGAGCTCCTGACATAATAGTTAGAAACGAAAAGAGAATGCTTCAAGAGGCTGTAGATGCTTTAATAGATAACGGTAGAAGAGGAAGACCTGTAACTGGTCCTGGAAACAGACCTCTTAAATCATTATCAGATATGCTTAAAGGTAAGCAAGGAAGATTCAGACAAAACCTTCTTGGTAAGAGGGTTGACTATTCAGGAAGATCAGTTATCGTTGTTGGTCCTGAATTAAAAATGTATCAATGTGGTCTTCCAAAAGAAATGGCTTTAGAATTATTCAAGCCTTTCGTTATGAAGAAATTAGTTGAAGACGGAGTTGCTCATAACATAAAGAGTGCTAAGAGAATGGTTGAAAGAGTAATGCCACAAGTATGGGATGTACTTGAAGAAGTTATCGCAGACCATCCAGTATTACTAAACAGAGCACCTACTCTACATAGACTAGGTATTCAAGCATTCCAACCAGTATTAGTTGAAGGTAGAGCTATAAAACTTCATCCACTTGTATGTACAGCATACAACGCTGACTTTGATGGAGACCAAATGGCTGTTCACGTACCTTTATCAGTTGAAGCTCAAGCAGAAGCTAGATTCTTAATGCTTGCAGCAGGTAATATAATGAAACCTTCTGATGGTAGACCAGTTTGTGTACCTACTCAGGATATGGTTCTTGGTTCATATTACTTAACAATGGATAAAGACGGAGCTAAAGGTGAAGGAAAATACTTCGCATCATTTGATGAAGTAATAATGGCTTACCAATTAAAAGAAGTTGATATTCATGCTAAGATTAACGTTAAAGTTACTAAAGAAATAGACGGAGAGCTTAAGTCAGGAATAATCAAAACAACTCCAGGATTTATAATATTCAATGAATGTATACCTCAAGACTTAGGTTTTGTAAATAGAGAAAATCCTGAAGAAATGTTCAATTTAGAAATAGATTTCTTAATAACTAAAAAGTCATTAGGAAAAATAATAGATAAATGTTACTTAAAGCATGGTCCAACTAAGACTTCAATAATGCTTGATAACATAAAAGCAACAGGATATCATTATTCATCAATTGGAGCTGTTACAGTTGCTGCTTCAGACATGATAGTTCCTCAAAAGAAATATGAGCTATTAAAAGAAGCTGATGAAACTGTAGATAAGATCGAAAAAATGTATAGAAGAGGTCTTATATCTGAAGATGAAAGATATGAAAGAGTTATAGAAAAATGGACTGAGACTACTGAGGAAGTTGCGGATACATTAATGAATAGCTTGGATAAATTTAACCCAATATTCATGATGGCAGACTCAGGAGCCAGAGGATCTAAGTCACAGATCAAACAGTTAGCTGGTATGAGAGGACTTATGGCGAGTCCATCAGGTAAAATCATCGAGTTACCAATCAGAGCATCATTTAGAGAAGGTCTTGACGTATTAGAGTATTTCATATCTACTCACGGAGCTAGAAAAGGTAACGCCGATACAGCACTTAAGACTGCTGACTCAGGTTACTTAACAAGAAGACTTGTTGACGTAAGCCAAGATGTTATAGTAAGAGAACACGACTGTGGAACTCAAAATGGTATTTACGTTGAAGAGATAAAAGAAGGTTCAGAAGTAGTTGAACAATTAGCTGAAAGATTAACAGGAAGATATACTGCAGAAGATGTTTTCCACCCAGAAACTGGAGAGCTTTTAGCTGCAAAAGATACTTATATGGATCCAATTTTAGCTGAAAAAATAGCTGACACTGGAATTCAAAAAGTAAAAATAAGATCAGTATTTACATGTGATTCTAAGGTTGGAGTATGTACTAAGTGTTATGGTATGAACATGGCAACATCATATAAAATAAATATTGGTGAAGCTGTTGGTATCGTAGCTGCTCAGTCAATCGGAGAACCAGGAACACAGCTTACAATGAGAACATTCCATACAGGTGGAGTTGCTGGAGCAGATATAACTCAAGGTCTTCCAAGGGTTGAAGAGTTATTCGAAGCAAGAAAACCAAAAGGATTAGCGATTGTAAGTGAAGTTGCAGGTACTGTAAGAATAGAAGAAACTAAGAAAAAGAGAACAGTTTATGTTGTTACTGATTCAGGAGAAGAATATAGCTATGATATACCATTTGGATCAAGATTAAAAGTTAAAGATGGTATAGCTATTGGAGCTGGAGATGAAATAACAGAAGGTTCAGTTAACCCACATGATATCATGAGCATTAAGGGTGTTGATGGTGCAAGAGAATACTTACTTTCAGAAGTTCAAAAAGTTTACAGACTTCAAGGGGTTGATATCAACGATAAGCACTTAGAAGTTGTAGTTAGACAAATGACTAGAAAGATAAAAGTAACAGAGCAAGGTGATACTAATTTATTACCAGGTGTAATGATTGATATGTTCGATTTCAGAGCTGAAAATGAAAGAGTTGAAAGCTTTGGAGGAGAAAAAGCTCAAGGAGATATAGTTCTTCTTGGTATTACTAAAGCAGCTCTTGCTACAGATAGTTTCTTATCAGCAGCATCATTCCAAGAAACAACAAGAGTTCTTACTGATGCAGCAATCAAAGGAAAAATTGATCCTCTTGTTGGATTAAAAGAAAATGTTATAATTGGTAAGTTAATTCCAGCAGGTACAGGTATGATGAAGTATAGATCATTAAAATTAAATACTGAAAACAGTAATCAAGAGACTGAAACAATAATTGAGATTGAAGAATAA
PROTEIN sequence
Length: 1179
LFELNNFDALQIGLASPEQIREWSRGEVKKPETINYRTLKPERDGLFCERIFGPIKDWECHCGKYKRVRYKGIVCDRCGVEVTKSKVRRERMAHIELAAPVSHIWYFKGIPSRMGLILDMSPRALEKVLYFASYIVIDPKETSLLKKQLLNEKEYREACDKYGEESFVAGMGAEAIKTLLSEIDLERTAAELKEELKQSTGQKKVRIIRRLEVVESFKSSGNKPEWMVVDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKKLVEDGVAHNIKSAKRMVERVMPQVWDVLEEVIADHPVLLNRAPTLHRLGIQAFQPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLAAGNIMKPSDGRPVCVPTQDMVLGSYYLTMDKDGAKGEGKYFASFDEVIMAYQLKEVDIHAKINVKVTKEIDGELKSGIIKTTPGFIIFNECIPQDLGFVNRENPEEMFNLEIDFLITKKSLGKIIDKCYLKHGPTKTSIMLDNIKATGYHYSSIGAVTVAASDMIVPQKKYELLKEADETVDKIEKMYRRGLISEDERYERVIEKWTETTEEVADTLMNSLDKFNPIFMMADSGARGSKSQIKQLAGMRGLMASPSGKIIELPIRASFREGLDVLEYFISTHGARKGNADTALKTADSGYLTRRLVDVSQDVIVREHDCGTQNGIYVEEIKEGSEVVEQLAERLTGRYTAEDVFHPETGELLAAKDTYMDPILAEKIADTGIQKVKIRSVFTCDSKVGVCTKCYGMNMATSYKINIGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGADITQGLPRVEELFEARKPKGLAIVSEVAGTVRIEETKKKRTVYVVTDSGEEYSYDIPFGSRLKVKDGIAIGAGDEITEGSVNPHDIMSIKGVDGAREYLLSEVQKVYRLQGVDINDKHLEVVVRQMTRKIKVTEQGDTNLLPGVMIDMFDFRAENERVESFGGEKAQGDIVLLGITKAALATDSFLSAASFQETTRVLTDAAIKGKIDPLVGLKENVIIGKLIPAGTGMMKYRSLKLNTENSNQETETIIEIEE*