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L3_129_030G1_scaffold_3459_1

Organism: L3_129_030G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: comp(14..379)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion system negative regulatory protein RspV n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K9X9_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 120.0
  • Bit_score: 219
  • Evalue 1.20e-54
Type III secretion system negative regulatory protein RspV {ECO:0000313|EMBL:EIK61519.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 120.0
  • Bit_score: 219
  • Evalue 1.70e-54
negative regulator of hrp expression HrpV similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 115.0
  • Bit_score: 183
  • Evalue 2.80e-44

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGAGCGCCCAGGGAACCCCGGCCGATGAACGCCAGGTCTTCCTCGACAGCCTGGTGGGCGGCTCTGCCGCCCACCTGACGCTTGGCCCGGGGGTAACAGCCAGCAACATGCAAGCCGGAACCCGTCAGGGTCTGGCCCTGCACGTGGCTCGCGAGGCGCTGCAAGCCTCACAATTGCAGAACGCGCTGGAGCGGCGTTTCGAGCAGGCCGTGGCATTCGATGGCTGCTTTATCTACATTGACGCACAGGACGCGCTGGTGATCTGGCATGCACTGCCCCCACAGCCCAACCTGCTCGACAGGCTCCTCAGCCGAATGTTGTCGTTGGCCAACCTTGAAACCCTGGATGCGCGTACCCGGCGCTGA
PROTEIN sequence
Length: 122
MSAQGTPADERQVFLDSLVGGSAAHLTLGPGVTASNMQAGTRQGLALHVAREALQASQLQNALERRFEQAVAFDGCFIYIDAQDALVIWHALPPQPNLLDRLLSRMLSLANLETLDARTRR*