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L3_131_368G1_public_UNK

In projects: L3_131_368G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 65.56 Longest contig: 662.15 Kbp Bin length: 106.21 Mbp GC content: 45.81 %
Contigs count: 17894 Features count: 113522 rRNAs count: 27 tRNAs count: 1756

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Displaying items 17501-17550 of 17894 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_131_368G1_scaffold_16766
Species: Erysipelotrichaceae bacterium CAG:64 (50%)
2 1114 bp 41.83 4.17 100.45
L3_131_368G1_scaffold_9847
Species: [Clostridium] bolteae (100%)
2 1774 bp 43.07 6.76 100.45
L3_131_368G1_scaffold_16877
Species: Clostridium sp. CAG:149 (50%)
2 1108 bp 47.56 3.79 100.45
L3_131_368G1_scaffold_9985
Order: Clostridiales (50%)
4 1753 bp 61.67 6.42 100.46
L3_131_368G1_scaffold_11667
Species: Escherichia coli (100%)
4 1523 bp 52.79 3.15 100.46
L3_131_368G1_scaffold_13975
Species: Enterobacter sp. MGH 24 (50%)
2 1305 bp 59.08 4.02 100.46
L3_131_368G1_scaffold_17340
Species: Klebsiella oxytoca (50%)
2 1081 bp 53.10 3.61 100.46
L3_131_368G1_scaffold_17457
Species: Clostridium sp. 7_2_43FAA (100%)
2 1075 bp 28.93 3.63 100.47
L3_131_368G1_scaffold_2544
Species: Butyricicoccus pullicaecorum (100%)
10 8125 bp 51.26 7.44 100.47
L3_131_368G1_scaffold_17623
Species: Dysgonomonas mossii (50%)
2 1066 bp 37.43 4.36 100.47
L3_131_368G1_scaffold_12039
Species: Clostridium sp. CAG:221 (100%)
2 1481 bp 32.61 4.25 100.47
L3_131_368G1_scaffold_14435
Species: [Clostridium] citroniae (50%)
2 1269 bp 43.34 17.14 100.47
L3_131_368G1_scaffold_4937
Species: Anaerostipes sp. CAG:276 (66.67%)
3 3586 bp 50.06 7.99 100.47
L3_131_368G1_scaffold_17916
Species: Clostridium butyricum (100%)
2 1051 bp 33.02 3.14 100.48
L3_131_368G1_scaffold_6864
Species: Escherichia coli (50%)
4 2508 bp 62.20 4.90 100.48
L3_131_368G1_scaffold_25916
Species: Dorea formicigenerans (66.67%)
3 1251 bp 38.29 149.04 100.48
L3_131_368G1_scaffold_12283
Species: Clostridium sp. CAG:221 (100%)
3 1454 bp 25.38 4.75 100.48
L3_131_368G1_scaffold_18190 3 1036 bp 34.65 3.19 100.48
L3_131_368G1_scaffold_10633
Species: Coprobacillus sp. 8_2_54BFAA (100%)
3 1654 bp 35.01 16.78 100.48
L3_131_368G1_scaffold_18304
Species: Clostridium sp. KLE 1755 (50%)
2 1030 bp 47.28 3.50 100.49
L3_131_368G1_scaffold_4616
Genus: Clostridium (50%)
4 3908 bp 38.95 7.22 100.49
L3_131_368G1_scaffold_18377
Genus: Enterobacter (66.67%)
3 1027 bp 57.84 4.97 100.49
L3_131_368G1_scaffold_18420
Species: Paenibacillus dendritiformis (50%)
2 1024 bp 48.14 3.66 100.49
L3_131_368G1_scaffold_7962
Species: Eubacterium plexicaudatum (75%)
4 2155 bp 43.48 10.58 100.51
L3_131_368G1_scaffold_11316
Species: [Clostridium] bolteae (50%)
2 1564 bp 54.28 6.62 100.51
L3_131_368G1_scaffold_8891
Species: Enterobacter cloacae (66.67%)
3 1937 bp 42.90 3.02 100.52
L3_131_368G1_scaffold_8100
Species: Clostridium nexile CAG:348 (100%)
2 2125 bp 42.73 172.80 100.52
L3_131_368G1_scaffold_10175
Species: Clostridium bolteae CAG:59 (50%)
2 1722 bp 52.56 6.88 100.52
L3_131_368G1_scaffold_11710
Species: Flavonifractor plautii (50%)
2 1519 bp 57.21 8.89 100.53
L3_131_368G1_scaffold_13841
Species: Lachnospiraceae bacterium 2_1_58FAA (50%)
2 1316 bp 48.71 4.56 100.53
L3_131_368G1_scaffold_13905
Species: Escherichia coli (100%)
2 1310 bp 42.82 3.78 100.53
L3_131_368G1_scaffold_11909
Species: Peptoclostridium difficile (50%)
2 1495 bp 47.56 5.12 100.54
L3_131_368G1_scaffold_11930
Species: Lachnospiraceae bacterium 1_4_56FAA (50%)
2 1492 bp 40.35 28.75 100.54
L3_131_368G1_scaffold_21208
Species: Erysipelotrichaceae bacterium 6_1_45 (66.67%)
3 1113 bp 54.81 110.24 100.54
L3_131_368G1_scaffold_14125
Domain: Bacteria (66.67%)
3 1292 bp 43.19 2.79 100.54
L3_131_368G1_scaffold_12427
Order: Clostridiales (80%)
5 1438 bp 59.81 3.76 100.56
L3_131_368G1_scaffold_10949
Genus: Enterobacter (66.67%)
3 1611 bp 57.05 2.89 100.56
L3_131_368G1_scaffold_14669
Order: Clostridiales (66.67%)
3 1250 bp 46.08 3.12 100.56
L3_131_368G1_scaffold_13446
Species: Lachnospiraceae bacterium 7_1_58FAA (57.14%)
7 3028 bp 61.72 52.11 100.56
L3_131_368G1_scaffold_8833
Species: Lachnospiraceae bacterium 9_1_43BFAA (50%)
2 1951 bp 40.18 6.30 100.56
L3_131_368G1_scaffold_11168
Species: [Clostridium] scindens (50%)
2 1581 bp 43.45 3.23 100.57
L3_131_368G1_scaffold_3558
Species: Anaerostipes sp. CAG:276 (66.67%)
6 5432 bp 47.29 7.01 100.57
L3_131_368G1_scaffold_14968
Species: Anaerostipes sp. CAG:276 (50%)
2 1226 bp 46.00 5.26 100.57
L3_131_368G1_scaffold_8213
Species: [Clostridium] innocuum (50%)
4 2094 bp 51.24 4.08 100.57
L3_131_368G1_scaffold_32564
Species: [Clostridium] clostridioforme (100%)
2 1220 bp 54.02 129.96 100.57
L3_131_368G1_scaffold_12936
Species: Clostridium butyricum (100%)
2 1393 bp 28.00 3.55 100.57
L3_131_368G1_scaffold_15097
Species: Blautia hydrogenotrophica CAG:147 (50%)
2 1217 bp 47.99 3.33 100.57
L3_131_368G1_scaffold_18219
Species: Clostridium bolteae CAG:59 (50%)
2 1035 bp 51.21 5.51 100.58
L3_131_368G1_scaffold_11408
Species: Clostridium sp. D5 (50%)
2 1551 bp 49.19 5.32 100.58
L3_131_368G1_scaffold_18269
Species: Lactobacillus crispatus (50%)
2 1032 bp 33.24 2.76 100.58
Displaying items 17501-17550 of 17894 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.