ggKbase home page

L3_133_000M1_scaffold_291_23

Organism: L3_133_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(24612..27167)

Top 3 Functional Annotations

Value Algorithm Source
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 851.0
  • Bit_score: 1652
  • Evalue 0.0
UPI0003D5A7F5 related cluster n=1 Tax=unknown RepID=UPI0003D5A7F5 similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 851.0
  • Bit_score: 1652
  • Evalue 0.0
hemC; porphobilinogen deaminase similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 346.0
  • Bit_score: 313
  • Evalue 1.60e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2556
ATGCACGACCTAGCTGGATTAGCCGATTACGATGTTTTGATTATCGGAGGAGGACTGGCCGGATTGACCAGCGCCTATACTCTGCAAAAACAGGGTGCGCGGGTGGCGGTGATTGAGGAAAGAGGACGCCCTGGCGGCCTAATTTGTTCGGGACGTTTTGGGGACTTCACTTTCGATATTGGCGCTGAAGCTTTCGCGGCGGGAGCTAGCGAAGTTAAAGATTTATGCGACGAGCTAGGATTGCCGCTGGTTGCCCCGAGCGGCAAATCCTGGATTTTTCACCACGAACGCCCAGGTCACCGGGAGGGCGCGCTTCCGATTCCCCACGGAATGTTAGGGATTCCTGCCAGCCTAGATGACCCAGGCATTGTGGGGGCGCTCAGCGAAGCAGAAATGCAGCGTGCCCGTGAGGACTTAACTATGGGGCCACAGGTAGGGGCGGATGAAACCACCGTCACCGGTCTGGTAACTGCCCGCCTAGGAAAAGCGGTTTTAGAAAAAGTAGTGGCGCCTGTTGCCGGCGGGATTCACTCGGCAAGCACCGACCGCCTAAACGCCGATACCGTGTTGCGCGGACTGCGTCCCGCCCTAAAAGAACACGGCTCGCTGGTGAAAGCGGTTGCCGCTTTGCGCGGACTAAGACCCGGCAAACCCGCCGTACTCGCCCCGGAAGGGGGAATGTTCCGCCTGGTAGAAACCTTAGCGCAGCGCATCGAAGAGGGCGGGGGGCTGATTTTGTCTCATGTGCGCGGCCTCGAACTGGAACCGGCGGCAAATGACTCAAACGCTGACGCCGACGCCGTTGCCGGCTCGAATCAACCCGGCTCAGCAGGCTGGAAGGTCACCGTTTCTAACACCAAATCAGGGCCGACCCCAGGGGCGAGCCCGATTAACATTGGCGAAGCCGTAACGGTCACTGTCCCGCAGGTAGTAGTGGCTTTACCAGGATATTTAGCCGCGCCGCTGCTGCGTGAAGTACCAGGGATTCAAGTCGGTGAGCTCCCGCAGGGCGGCCCGATCGCACACGTGACTCTGTTTGTGGACTGCCCGGCGTTAGATGCTCATCCGCGCGGGTCCGGAATGTTGGTGCAACGCCCCAGCAATAAAGATATTGAAAATGGCTGCGTGGGAGCGAAAGCTATCACTCATTACACTTCCAAATGGCCGTGGGCGGAACAAGCAGCCGGTAAAGGTCGCCACCTGCTGAGAGTATCTTATGGTTGGGCAAATGGACCGGAGATTCCGGTATCGGTCGAGGGCGCGTTAAAGGATGCTTCCCGGCTGCTGGGGGTAGCGATTTCTCCAGAACAACTGCTCGGTTCGATGATTATTCACTGGGATGGCTCTTTGCCGCCTTTCACTCCTAAACATCGGGAAATGACCACCAAGCTGCTAGAAGACTTGCATGCCTATCCCGGTCTGGATTTGGCGGGGTCTTGGGTTGCCGGTTCGGGGATTGCGGCAGTTGTTCGTCAGGCGCAAACGATTAAATTGCGCGGTACCGGTTGGATTAGCGAAGCTAAGGCTGACGCTTTAGTTTTGGGTACTCGCGCTTCCCGCCTGGCGGTAACCCAATCGGAAACCGTAGCTAGCGCTTTGCGCGAACGCGGACTAAATGTGCAGCTACGACAGGTACGCACGGCAGGCGATATTTCCCGCGCCTCTTTACAAAAATTGGGAGGAGTGGGCGTGTTTGCCGCGCAACTACGCCTAGCCCTCTTGGAGGGAAACTGTCATTTAGCAGTGCATTCTTTCAAAGATTTACCTACCCAGGAGGCTCCGGGTCTAAAAGTTGCCGCGATTCCGAACCGCGCAGATGCCCGGGACGCGCTATGTGCGGCACCTGGTTTAACTTTGGAGACTTTGCCTCAGGGAGCCAAAGTGGGGACGGGATCTCCGCGCCGCGCCGCCCAGATTTTAGCTATGCGTCCCGACCTCAAAATCGTGGATATTCGCGGCAATGTTCCTACCCGCCTAGGCAGGGTGAAAGGCATTGCCGCTCCTGAGGGTGACTTTACTGATGGACGGGAGACTCGGGAAAAAATCGTGACCGGCGCGCACGACTTGGATGCGGTGATACTGGCGGCGGCCGGTTTGGATCGGATTGGGCTGGGCGCTTACGCCAATGAGCGGTTTGATCCTGAACAGGTGCTGCCAGCCCCAGCGCAAGGAGCACTCGCGGTAGAGGCTTCAGAGGCAACGCTTAAAGCCCACCCCGATTTAGCGGCCGCATTGGAAGAGCTTAACGACCTGGCAACTGCGCTTACCTCTACGGCGGAGCGGGCAGTATTAGCGGAACTAAACGCCGGGTGTGCTGCGCCGGTAGGGGCCTTTGCCCAGATGGAGCGGGGGATACTCACCCTTACTGCCGCGATTATTTCCCTCGATGGTACTCGCGAGGTACGCGTCAATGACTCCTTGCAGGCCGATCCGGAAAAAACCTTCGCCGAGATGCTTGACCAGGCGCGTCAGCTGGGTGAGAGCGTGGCGCGCGCCCTCCTAGAATCTGGGGGCGCCGAGCTTGCTGACCTGGGCGCTGCTAAGGCGCGCGGCTAA
PROTEIN sequence
Length: 852
MHDLAGLADYDVLIIGGGLAGLTSAYTLQKQGARVAVIEERGRPGGLICSGRFGDFTFDIGAEAFAAGASEVKDLCDELGLPLVAPSGKSWIFHHERPGHREGALPIPHGMLGIPASLDDPGIVGALSEAEMQRAREDLTMGPQVGADETTVTGLVTARLGKAVLEKVVAPVAGGIHSASTDRLNADTVLRGLRPALKEHGSLVKAVAALRGLRPGKPAVLAPEGGMFRLVETLAQRIEEGGGLILSHVRGLELEPAANDSNADADAVAGSNQPGSAGWKVTVSNTKSGPTPGASPINIGEAVTVTVPQVVVALPGYLAAPLLREVPGIQVGELPQGGPIAHVTLFVDCPALDAHPRGSGMLVQRPSNKDIENGCVGAKAITHYTSKWPWAEQAAGKGRHLLRVSYGWANGPEIPVSVEGALKDASRLLGVAISPEQLLGSMIIHWDGSLPPFTPKHREMTTKLLEDLHAYPGLDLAGSWVAGSGIAAVVRQAQTIKLRGTGWISEAKADALVLGTRASRLAVTQSETVASALRERGLNVQLRQVRTAGDISRASLQKLGGVGVFAAQLRLALLEGNCHLAVHSFKDLPTQEAPGLKVAAIPNRADARDALCAAPGLTLETLPQGAKVGTGSPRRAAQILAMRPDLKIVDIRGNVPTRLGRVKGIAAPEGDFTDGRETREKIVTGAHDLDAVILAAAGLDRIGLGAYANERFDPEQVLPAPAQGALAVEASEATLKAHPDLAAALEELNDLATALTSTAERAVLAELNAGCAAPVGAFAQMERGILTLTAAIISLDGTREVRVNDSLQADPEKTFAEMLDQARQLGESVARALLESGGAELADLGAAKARG*