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L3_133_000M1_scaffold_75_27

Organism: L3_133_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(28178..31762)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 1194.0
  • Bit_score: 2342
  • Evalue 0.0
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 99.9
  • Coverage: 1194.0
  • Bit_score: 2342
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6D997_BIFLN similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 1194.0
  • Bit_score: 2342
  • Evalue 0.0

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Taxonomy

Bifidobacterium longum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3585
ATGGCCGGTGAGGCGACGCACCCGGACCTGATCAACGGCTCACTGGTAGGCATCCTGTCTGAGCTGGAACAGGACAAGACCTTCCTGAAGCTCGCCGCCGGCGACATCGAGGCTTCGGACGACGTCGACAACTCCGTCCTGGCCGGCATCCCCGAAGGTTTGCGCCCGGCTTTGGCCGCCGCCATCGGGCAGGGTGTGGCCGGCAAACCCGGCAAGCCGGTCGTGCTGGTCGTGGCCTCCGGCCGCGAAGCCGAAGAGACCGTGGGCTCGCTGCGCTCCTGGTATGATGGCGACCCGAACGACATCGCCCAGCTCGAAGCCTGGGAAACCCTGCCGCACGAGCGTCTGAGCCCGCGCGCGGACACCGTGGCCAGCCGCATGGCCGTGTTCCGCAGACTCAAGCATCCGAGCGATACCGATTCGATGTTCGGCCCGATTCGCATTCTCGTCATGCCGATCCGCTCGCTCATCCAGCCAGTCGTCCAAGGACTGGGCGATGTCGAGCCGCTCGTGTTCACCGTGGGGGAGGACCTGCCCCTCGACGAAGCCGCCAAACGTCTGATCGAAAACGCCTATACGCGCGTGGACCTGGTCATGGACCGTGGCGAGTTCGCGGTGCGCGGAGGCATTCTTGACGTATTCCCGCCCACCGCACCGCACCCGGTGCGTATCGAATTCTTCGGCGACGAAATTGACACCATCAAGGAATTCCACGCCTCCGACCAGCGTACCTACGGCGACGGCCTCAAGACCATTTGGGCCACCGCATGCCGTGAACTGCAGCTGACCGACGCCGTGCGCACCCGCGCCAAAGCCTTGGTCGGTTCGATTCCCAATGCTGAGGACATGCTCGAATCCATCGCCAACGCCATTCCGGTCGAAGGCATGGAATCCCTGATGCCCGCACTCGTGGACCATCTGGAACCGGTGGGCTCCATGCTTCCCAAGCACGCCGTGATCCTCCTGAGCGACCCGGAGAAACTACGCCGCTCCGCCGAAGACTTGGCAAAAACCGCGAACGAGTTCCTGGCCGCCAGCTGGCATGTGGCCGCCTCCGGCCACGGCGCCGGCGCGCCCATCAGCTTCGACGAAGCCAGCTTCCTCGACTATGCGGAAACCATCAGCTCCCTCGAATACTCCGAACATCCGGTGATTCGCCTCACCAGTTTCGGCGTGGACACCACGTTGACCGGCCATGTGCAGCTCGACGCCCAGAACCCGGCCGAATTCCGAGGGGATGAGGCCAAGGCCTCCCAAGGCATTGAAGGCCTGCTCGATGCCGGCTTCCACGTCACCATCACCGCCGCTGCGGCCGGCACCTTGGCTAGGCTCAAGCGTGCGATCAACACTACCGGCATCGCCAATTTCGACGTCATCCGCTCTCAGGCCATCGACGGCTTCGTGGACAAAGCCGCCAAAATCGCCCTGCTCACCGAACGCGACCTGACCGGCCGCACTTCAGCCGTGGCCGTGGCCAAAACGCCGAAACGCCGGCGCAAGGCCATCGACTTGGTGGAGCTCAAAAAAGGCGATTACGTGGTGCACGAGCAGCACGGCATTGGCCGGTTCATCGAAATGCGTCAGCGCACCATCGGCACCGGCGCCAACAAAACCACTCGCGAATACCTGGTCATCGAATATGCGCCTTCCAAGCGCGGCGCCCCGGCGGACAAACTGTTCATCCCCACCGACCAGCTCGACCAGGTCAGCAAATACATCGGCGCCGAAGCCCCCAAGCTCAACAAGCTCGGCGGCTCCGACTGGGCGGCCACCAAGGCCAAGGCCCGCAAGCACGTCCACGAGATCGCCGACGACCTGATCAAGCTGTACTCCGCCCGCCAGCGCGCCAAGGGCTTCGCGTTCAGCCCGGACACCCCATGGCAGAAAGAGCTGGAAGACGCCTTCCCCTATCAGGAAACCGCCGACCAGCTCACCACCATCGACGAAGTTAAATCCGACATGGAAAAGCCCGTGCCGATGGACCGCCTCATCTGCGGCGACGTGGGCTTCGGCAAAACCGAAATCGCACTGCGTGCCGCCTTCAAGGCCGTGCAGGACGGCAAGCAGGTGGCCGTGCTCGTGCCCACCACGCTGCTTGTCCAGCAGCATTACGAGACGTTCAGCGAACGATTCGAGGGTTTCCCGGTCAATGTGGCGGCCATGAGCCGATTCCAGACCACCAAAGAGATCAACGAGACCATCGAGGGGCTGGAAACCGGCACGGTGGACGTGGTCATCGGCACGCACAAGCTGCTGAACCCGAAAATCAAGTTCAAGGATCTGGGACTCGTCATCATCGATGAGGAGCAGCGTTTCGGCGTGGGACACAAGGAGACGCTGAAAGCCCTGCGCACCAACGTGGACGTGCTGTCCCTGTCTGCCACGCCTATCCCGCGCACGCTGGAAATGGCCGTGACCGGCATTCGCGAGATGTCCACGCTCGCCACCCCGCCCGAAGACCGGTTGCCGGTGCTGACCTATGTGGGCGCCTACGAGGATGCGCAGGTCACCGCAGCCGTACGCCGCGAACTGCTGCGAGGCGGCCAGGTGTTCTATGTCCACAATCGTGTGCAGGACATCTCGTCCATCGCCGACAAGATCCACACGCTGGTGCCCGAGGCGCACGTCGGCATCGCCCACGGCAAGATGGGGGAGAAGCAGCTCGACCAGATCATCCGCGACTTCTGGCATCGCGACATCGACGTGCTCGTGTGTACCACAATCATCGAGACCGGTCTTGATATCTCCAATGCGAACACGCTGATCGTCGACCATGCCGACCGTTTCGGCTTGAGCCAGCTCCATCAGCTGCGTGGCCGCGTCGGTCGCGGCCGCGAGCGCGCGTACGCCTACTTCCTGTACGACCCGTCCAAGCCGATGACCGAGCAGTCCCATGACCGGCTCGCCACCATCGCGCAGAACACGGCGCTCGGCTCCGGTTTCGATGTGGCCATGAAGGACTTGGAATTGCGCGGCACCGGTAACCTTCTGGGCGACGAGCAGTCCGGCCATATCGAGGGCGTGGGCTTCGACCTGTACGTACGCATGGTGTCCGAAGCCGTGGAAAAGTACAAGGAGCCCGAAGAGAACGTCGAGCCGGTGGCCGTGTCCATCGACCTGCCCATCGAAGCGTCGATTCCGATCGAGTACATCGATTCGGACAAGCTGCGTCTGGAAGCGTACCGCAAGCTCGCCTCCGTCCGCAACGAGGCCGATCTGAAGGATTTGGAAGAGGAACTTACCGACCGTTACGGCAAGCCGCCGGTCGAATTCGAGACCCTGTTCGACGTGGCCCGTCTGAAGTTCAAGGCCCGCAAGCTCGGCATTTCGGAGATTCTCGCGCAATCCAACCGCGTGCGCATCGGTCGCATCGACCCGCCCGAATCCATCCAGATGCGTATGGGCCGTATTTACAAAGGCACCCAATACCGCCCGGTCACCCACCAGCTCATCGTCCCCACCCCGTTCACCGGCTCCCTGGGCCAAGGCCCCATGAGCTCCGACCAGGTAGTCCTCTGGACCAACCAGTTACTTGATGATTTGGCATGGACCCCGTCGTCAAGCAAACGGCAGAGCCGTTTGTAG
PROTEIN sequence
Length: 1195
MAGEATHPDLINGSLVGILSELEQDKTFLKLAAGDIEASDDVDNSVLAGIPEGLRPALAAAIGQGVAGKPGKPVVLVVASGREAEETVGSLRSWYDGDPNDIAQLEAWETLPHERLSPRADTVASRMAVFRRLKHPSDTDSMFGPIRILVMPIRSLIQPVVQGLGDVEPLVFTVGEDLPLDEAAKRLIENAYTRVDLVMDRGEFAVRGGILDVFPPTAPHPVRIEFFGDEIDTIKEFHASDQRTYGDGLKTIWATACRELQLTDAVRTRAKALVGSIPNAEDMLESIANAIPVEGMESLMPALVDHLEPVGSMLPKHAVILLSDPEKLRRSAEDLAKTANEFLAASWHVAASGHGAGAPISFDEASFLDYAETISSLEYSEHPVIRLTSFGVDTTLTGHVQLDAQNPAEFRGDEAKASQGIEGLLDAGFHVTITAAAAGTLARLKRAINTTGIANFDVIRSQAIDGFVDKAAKIALLTERDLTGRTSAVAVAKTPKRRRKAIDLVELKKGDYVVHEQHGIGRFIEMRQRTIGTGANKTTREYLVIEYAPSKRGAPADKLFIPTDQLDQVSKYIGAEAPKLNKLGGSDWAATKAKARKHVHEIADDLIKLYSARQRAKGFAFSPDTPWQKELEDAFPYQETADQLTTIDEVKSDMEKPVPMDRLICGDVGFGKTEIALRAAFKAVQDGKQVAVLVPTTLLVQQHYETFSERFEGFPVNVAAMSRFQTTKEINETIEGLETGTVDVVIGTHKLLNPKIKFKDLGLVIIDEEQRFGVGHKETLKALRTNVDVLSLSATPIPRTLEMAVTGIREMSTLATPPEDRLPVLTYVGAYEDAQVTAAVRRELLRGGQVFYVHNRVQDISSIADKIHTLVPEAHVGIAHGKMGEKQLDQIIRDFWHRDIDVLVCTTIIETGLDISNANTLIVDHADRFGLSQLHQLRGRVGRGRERAYAYFLYDPSKPMTEQSHDRLATIAQNTALGSGFDVAMKDLELRGTGNLLGDEQSGHIEGVGFDLYVRMVSEAVEKYKEPEENVEPVAVSIDLPIEASIPIEYIDSDKLRLEAYRKLASVRNEADLKDLEEELTDRYGKPPVEFETLFDVARLKFKARKLGISEILAQSNRVRIGRIDPPESIQMRMGRIYKGTQYRPVTHQLIVPTPFTGSLGQGPMSSDQVVLWTNQLLDDLAWTPSSSKRQSRL*