ggKbase home page

L3_133_000M1_scaffold_326_29

Organism: L3_133_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(46218..48962)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 914.0
  • Bit_score: 1800
  • Evalue 0.0
DNA-directed RNA polymerase n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3AS00_BIFLN similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 914.0
  • Bit_score: 1800
  • Evalue 0.0
DNA-directed RNA polymerase beta' subunit similarity KEGG
DB: KEGG
  • Identity: 99.9
  • Coverage: 914.0
  • Bit_score: 1800
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium longum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2745
GTGGTCGGCCCGTCCCTGCGCATGCACCAGTGCGGTCTGCCGAAGCCGATGGCCCTCGAGCTGTTCAAGCCGTTCGTCATCAAGCGCCTCGTGGACCTGAACTATGCGCAGAACATGAAGTCCGCCAAGCGTCTTGTGGACCGCGGCGACGCCGAAGTGTGGGGCGTGCTCGAGGAGGTCATCTCCGAGCACCCCGTGCTGCTCAACCGTGCACCTACGCTGCACCGTCTGGGTATTCAGGCATTCGAGCCGATCCTGGTGGAAGGCAAGGCCATCCACCTGCCGCCGCTGGCCTGCGCCGCCTTCAACGCCGACTTCGATGGTGACCAGATGGCAGTCCACCTGCCGCTCTCCGCAGAAGCCCAGGCCGAGGCCCGCTCGCTGATGATGGCTTCCGACAACATCCTGAAGCCGGCCGACGGCCACACCGTGACCATGCCGAGCCAGGATATGATCCTCGGTTTGTACTACCTGTCCACCGTGCTGGAAGGCGTCAAGGGCCAGGGCCGCGTGTTCTCCTCGCTGGAAGAGGCCGAAATGGCCCTCGACCGCCACGAGATCGACATGCAGGCCAAGGTGCTCATCCGCCTGCCCGAGAGCTTCGTGCTGCCGAAGAACTGGGAGCCCGGCGAAGTCAAGGTGCTCGACCCGCGCGAAGGCGAGGACGAGGTCGTCAAGGAAGAACGCTTCCACGACGGCACCGTGCTGTTCGCCACCTCCTACGGCCGCATCCTGTTCAACGAGACCCTGCCGACCGACTACCCGTTCGTCAACGAGCAGGTGGCCAAGGGCCGTCTGTCCAAGATCGTCGATGACATCGCCATGCGTTACTCCACCCAGCAGGTGGCCGCCACGCTGGATGCCCTGAAGGATCTCGGCTTCACCCGCGCACCGTGGTCCGGCGTGTCCTTCGCGTTCTCCGACGTGAACGAGCCGCCCGAGCGCGACGAGAAGATCGCCGAGTACGAGGCCAAGGCCGACAAGGTCAACGCCAACTACGAGATGGGTCTGTTGACCGAGGAAGCTCGCCGTCAGGAACTCATCGACCTGTGGACCGAGTGCACCGCCGAAGTGTCCAAGGAAGTCGAGGAGAAGTTCGACCCGACCTCCAACCTGGCCATCATCGTGCAGTCTGGTGCACGAGGCAACATGATGCAGATCAACCAGATTGCAGGTATGCGAGGCCTCGTGGCTAACCCGAAGGGTGAGATCATTCCTCGTCCTGTGAAGTCCAACTACCGCGACGGCCTGTCCGTGCTGGAGTACTTCATCTCCCAGCACGGTGCACGTAAGGGTCTGGCCGATACCGCACTGCGTACCGCAGAATCCGGTTACCTGACCCGTCGTCTGGTCGACGTCTCCCAGGACGTCATCGTGCGCGAAGAGGACTGCGGCACCAAGGCCGGTCTGCCCATCCGCGTCGCCGAGCGCGACAACGACGGCAACCTGGTGCTCGTCAAGGCCGCCGACGGTGGCCCGTACTCCCGTCTGCTCGCCGCCGACGTCATCGACCCGGCCGACGGACAGACCGTGCTGTACAAGCGCGACGACGCCCTGTCCATGGACGTGCTCAACGACCTCGTGGCCCACGGCGTCGAGGAAGTCAAGTGCCGTTCCGTGCTGACCTGCGAGTCCAAGCGCGGCGTGTGCGCCAAGTGCTACGGCTGGTCCCTGGCCACCAACAAGCTGGTCGATGTCGGCGAGACCGTCGGTATCGTCGCCGCCCAGTCCATCGGTGAGCCTGGTACCCAGCTGACGCTGCGTTCCTTCCACTCCGGTGGTGTGGCCGCGGCCTCCGATATCACCCAGGGTCTTCCCCGTGTCACCGAGCTTTTCGAGGCCCGCACCCCGAAGGGTGAGGCCCCGATCACCGAGTTCGCCGGCAGCATCAAGATCGTGGAGAACGATCGCGGTCGCCAGATCATCCTGACCCCGGACGCCGATTCCGGCGCACCGAAGGAAGACGGCGTGATCAAGCCGATCACCTACCAGGTCTCCAAGCGCGTGCCGCTCAAGGTTGCCGACGGCGACCACATCAAGGTCGGCACCCAGCTGGTCGAAGGTTCTGTGGATCCCAAGAAGATCCTCACCATCCTCGGCAAGCGCGCCGCCCAGGTCAACATCGTGGAGGAAGTGCACACCGTGTACCGCTCCCAGGGTGTGGATATCCACGACAAGCACATCGAGGTCATCGTGCACCAGATGACCCGTCGCGTGACCATCATCGACTCCGGCGACACCGACCTGCTGCCGGGTGAGCTGGTGGACAACGCCCGCTTCCGCGAGATCAACCGCAACATCGTCAAGAACGGTGGCCGTCCGGCCGTCGGTCGTCCGGCGCTTATGGGTATCACCAAGGCGTCGCTGGCCACCGACTCCTGGCTGTCCGCCGCATCCTTCCAGGAGACCACCCGCGTGCTCACCGAAGCCGCCCTCTCCGAGAAGGTCGACGACCTCAAGGGCCTCAAGGAGAACGTCATCATCGGTAAGCTCATCCCGGCCGGTACGGGCCTCGCGCGCTACCGCAACGCCGCGGTCGAGCCTGACAAGGCCATCCGCGACACCATCTACCCGAACTTCGGTCTGGGCGGCGATGGCGATCTCGGCGACGCGAGCTTCTCCGACGCCGACCTGTCTGACCTGAACTTCTCGAACCTCGAGTTCGGCGATCTGAAGCTCGGCGACGACTTCAACCCGGATGATTTCTACTCCGATCAGGGCGGTCAGCCTGACATCGAGGAGTAA
PROTEIN sequence
Length: 915
VVGPSLRMHQCGLPKPMALELFKPFVIKRLVDLNYAQNMKSAKRLVDRGDAEVWGVLEEVISEHPVLLNRAPTLHRLGIQAFEPILVEGKAIHLPPLACAAFNADFDGDQMAVHLPLSAEAQAEARSLMMASDNILKPADGHTVTMPSQDMILGLYYLSTVLEGVKGQGRVFSSLEEAEMALDRHEIDMQAKVLIRLPESFVLPKNWEPGEVKVLDPREGEDEVVKEERFHDGTVLFATSYGRILFNETLPTDYPFVNEQVAKGRLSKIVDDIAMRYSTQQVAATLDALKDLGFTRAPWSGVSFAFSDVNEPPERDEKIAEYEAKADKVNANYEMGLLTEEARRQELIDLWTECTAEVSKEVEEKFDPTSNLAIIVQSGARGNMMQINQIAGMRGLVANPKGEIIPRPVKSNYRDGLSVLEYFISQHGARKGLADTALRTAESGYLTRRLVDVSQDVIVREEDCGTKAGLPIRVAERDNDGNLVLVKAADGGPYSRLLAADVIDPADGQTVLYKRDDALSMDVLNDLVAHGVEEVKCRSVLTCESKRGVCAKCYGWSLATNKLVDVGETVGIVAAQSIGEPGTQLTLRSFHSGGVAAASDITQGLPRVTELFEARTPKGEAPITEFAGSIKIVENDRGRQIILTPDADSGAPKEDGVIKPITYQVSKRVPLKVADGDHIKVGTQLVEGSVDPKKILTILGKRAAQVNIVEEVHTVYRSQGVDIHDKHIEVIVHQMTRRVTIIDSGDTDLLPGELVDNARFREINRNIVKNGGRPAVGRPALMGITKASLATDSWLSAASFQETTRVLTEAALSEKVDDLKGLKENVIIGKLIPAGTGLARYRNAAVEPDKAIRDTIYPNFGLGGDGDLGDASFSDADLSDLNFSNLEFGDLKLGDDFNPDDFYSDQGGQPDIEE*