ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

L3_133_000M1_scaffold_27317_2

Organism: L3_133_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: 1278..1736

Top 3 Functional Annotations

Value Algorithm Source
PTS system, Fru family, IIC component n=6 Tax=Clostridium clostridioforme RepID=N9VYH4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 153.0
  • Bit_score: 292
  • Evalue 1.90e-76
PTS system fructose-specific EIIBC component {ECO:0000313|EMBL:KJJ77522.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 153.0
  • Bit_score: 293
  • Evalue 9.10e-77
PTS system fructose subfamily transporter subunit IIC similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 153.0
  • Bit_score: 282
  • Evalue 4.20e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. FS41 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 459
ATGGCAAAACAACAGAGAAATATTATGAAACATGTTATGACCGGTATTTCGTATATGATTCCAATTATTGTGGCAGGCGGTATCCTTGGAGCGCTGGCAAAGGCGTTTGGCGGCTGGGATATAGGAAGCGCGGTAGAAGCTGGTGCAACACCGTTCTCTAATTTAAATCCTTTTACATGGACGGGTTTCTGGTGGGGAGTAAATAAACTAAGCTCTTATGCAATGGATTTTGCAGTAGCAGTAATGACTGCCGGTGTAGCATATTCTATTTCCGGACGTCCGGGCATTGTTCCAGGTCTTGTGATCGGATATTGTTCTTCTCAATCTAAGGCTGGATTTCTTGGCGGCCTTTTAATGGCATTTATCATTGGATGGTTTGTGAATTGGATGAAAACATGGAAATTGCCAAAGTGGTGTGAGGGATTAATGCCTGTTATGTTTATTCCTGTACTTTCTACT
PROTEIN sequence
Length: 153
MAKQQRNIMKHVMTGISYMIPIIVAGGILGALAKAFGGWDIGSAVEAGATPFSNLNPFTWTGFWWGVNKLSSYAMDFAVAVMTAGVAYSISGRPGIVPGLVIGYCSSQSKAGFLGGLLMAFIIGWFVNWMKTWKLPKWCEGLMPVMFIPVLST