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L3_133_123G1_scaffold_378_23

Organism: L3_133_123G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: comp(17703..18476)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Clostridium RepID=U2BQG6_CLOSY similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 257.0
  • Bit_score: 507
  • Evalue 6.30e-141
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 257.0
  • Bit_score: 507
  • Evalue 8.80e-141
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 251.0
  • Bit_score: 228
  • Evalue 2.10e-57

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Taxonomy

[Clostridium] symbiosum → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 774
TTGGAAATCACACAGGATTTTTCTCATATGACAAATGAAGAACTTCTGGATGAATATATGCATAACAGAAGCCGGGAAATAAAAGAGGAGCTGATATTGCGCTATATTCCATTGGTGAGACAGATAGCGAAACAGATGTGGAATGTATATTCAAATTTCTCTCAGATTGATGATATCATTAATGAGGGGGTTTTTGTTATCATGACGGCCTTAGATCGGTACGAAGTTGATAAAAATGTAAAGTTTGAAAGTTATGTAGTGAAAAGACTCCGGGGTATGGTCATTGATTTAGCCAGGAAACAGGATTGGCTGACACGGGGCGAGCGGAAAATAGCAAAAAATATGGAGAATGTGAGGGACAGGCTGTATGAGTGCCTGGAACGTCCTCCGACAGATGAAGAGGTTGCAGGGGAGCTTGGTATTACTTTAAAACACTATTATGAGCAACAGCAAAGGATTGCCCTGTTTAATGTGATATCCCTGGATTTGATTATGGATGAAACGGCAGATAAAAAGTGGAAGGATTCTGTCCCAGTAGTAGGAGAAGAATCAGATCCAGAGCTTCAGTCTTTGAGGAATGAAAAAAAGGACTGTTTAAGAAGAGGAATTGAAGCACTTGGAGAAAATGAACGTCTAGTAATTTCTCTCTATTATGAACAGGAGCTAAGTATAAAGGAGATTGCAGGGGTGATGGGGGTGAGTAAACCCAGGATATCCCAAATACATATAAATGCACTTAAGAAACTGAAAACCTATATGGAAGAAAATTGGTGA
PROTEIN sequence
Length: 258
LEITQDFSHMTNEELLDEYMHNRSREIKEELILRYIPLVRQIAKQMWNVYSNFSQIDDIINEGVFVIMTALDRYEVDKNVKFESYVVKRLRGMVIDLARKQDWLTRGERKIAKNMENVRDRLYECLERPPTDEEVAGELGITLKHYYEQQQRIALFNVISLDLIMDETADKKWKDSVPVVGEESDPELQSLRNEKKDCLRRGIEALGENERLVISLYYEQELSIKEIAGVMGVSKPRISQIHINALKKLKTYMEENW*