ggKbase home page

L3_133_123G1_scaffold_8067_2

Organism: L3_133_123G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: 753..1121

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=2 Tax=Clostridium RepID=B6FM19_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 123.0
  • Bit_score: 236
  • Evalue 9.90e-60
Uncharacterized protein {ECO:0000313|EMBL:CDC22731.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 123.0
  • Bit_score: 236
  • Evalue 1.40e-59
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 29.7
  • Coverage: 118.0
  • Bit_score: 59
  • Evalue 6.10e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium nexile CAG:348 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 369
ATGGGAGGAAGAATAGAATTTCGTGAAAAACTAAGCGGTATTTTGAAGATGGCAGAAGAGAATGGATGCCAGATTACAATAGACGAGGTAGAATGTTATTTTGAAGAGGAACATTTGTCAAAGGAACAGATAGAATTAGTCTTCGACTATCTTTTAGCACAAAAGATAGTCGTAAAAGGCTATGAGAAGACTGGCGGAAGTGTGACGAGCAGTGAGGAAAACAAGGTCGTATTTACTGAGGAAGAACAACGCTATCTTAAAGAGTATATGAAAGATATTGGCGGAATCAGAGAAGCTGCTGAAGAAGAACGAGAAGCGTTGTTTGAAAAGGTATTGGAAGGAGATGCACTCGCAAAAAGCAGGCTGGTG
PROTEIN sequence
Length: 123
MGGRIEFREKLSGILKMAEENGCQITIDEVECYFEEEHLSKEQIELVFDYLLAQKIVVKGYEKTGGSVTSSEENKVVFTEEEQRYLKEYMKDIGGIREAAEEEREALFEKVLEGDALAKSRLV