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L1_007_000M1_scaffold_14_7

Organism: dasL1_007_000M1_concoct_78_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 5192..6127

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 311.0
  • Bit_score: 623
  • Evalue 1.00e-175
rsmH; Ribosomal RNA small subunit methyltransferase H (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 311.0
  • Bit_score: 622
  • Evalue 6.00e-176
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZ71_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 311.0
  • Bit_score: 623
  • Evalue 7.30e-176

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Taxonomy

Ruminococcus sp. CAG:57 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 936
ATGGAATTTAACCACATTCCCGTACTGCTTGATGAGTGCTTGGATGGTCTGAACATTCGACCTGACGGCATTTACTGCGACGGCACTGCCGGAGGAGCAGGACATTCGAGAGAGATCGCTAAAAGGCTTGACGGCGAAAAGGGCGGCAGGCTTGTGGCTATAGACAGAGATCCCAAAGCGGTGAAAACTGCGACTGAACGGTTGGCAGGCTATCCTGCGACTGTTGTGAGAGGGAATTACTCTGAGATAGACGAGATATTTGAAAGGCTCGGCATAAGCGGTGCTGACGGCATTCTTATGGATCTGGGCGTTTCCTCTTATCAGCTTGACAATGCGGAGAGAGGTTTTTCCTATCACAATGACGCACCTCTTGATATGAGAATGTCAGGGGAGGGGCTTTCCGCCAAGGACGTTGTGAACGGATATGATTATCAGAGCCTTGCGAGGATAATTTTCGAGTACGGTGAAGAAAAGTTTTCAAGAAGCATTGCTTCTAAGATAGTAAAATACAGAGAACAAAAACCGATAGAGACAACTATGGAGCTTGCCGAGATAATAAAAAGCGCAGTTCCACAGAAGGCAAGGCGTGAGAAAAACCCTTGCAAAAAGACTTTTCAGGCTATCAGGATAGAGGTAAATAAGGAGCTTGAACATTTGAATATCGCTCTTGACAAGGCGTTCGATTGTCTTAACGTGGGCGGCAGGCTTTGCATAATCACTTTCCACTCGCTGGAGGACAGATTGGTAAAGCAGAGATTTCAGAGCTTCTGCAAGGGCTGTATATGTCCGCCTGATTTTCCTCAGTGCATATGCGGAAGAACGCCTAGGGGAAGGCTTGTGAACAGAAAGCCTATAGAGGCTGATGAAAAGGAGCTTGCGGAGAATAACAGAAGCCGCAGTGCTAAGCTCAGGGTGATCGAGAAGATCAAGGACTGA
PROTEIN sequence
Length: 312
MEFNHIPVLLDECLDGLNIRPDGIYCDGTAGGAGHSREIAKRLDGEKGGRLVAIDRDPKAVKTATERLAGYPATVVRGNYSEIDEIFERLGISGADGILMDLGVSSYQLDNAERGFSYHNDAPLDMRMSGEGLSAKDVVNGYDYQSLARIIFEYGEEKFSRSIASKIVKYREQKPIETTMELAEIIKSAVPQKARREKNPCKKTFQAIRIEVNKELEHLNIALDKAFDCLNVGGRLCIITFHSLEDRLVKQRFQSFCKGCICPPDFPQCICGRTPRGRLVNRKPIEADEKELAENNRSRSAKLRVIEKIKD*