ggKbase home page

L1_008_000G1_scaffold_404_26

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 33794..34465

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 223.0
  • Bit_score: 456
  • Evalue 1.20e-125
endonuclease III (EC:4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 223.0
  • Bit_score: 449
  • Evalue 3.80e-124
Endonuclease III n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8X1_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 223.0
  • Bit_score: 449
  • Evalue 1.30e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGCCCAGAGAATCAAAGAAAGTCAAGGTAGAACGCGGCATTGAGCTGTGCCGACGCATGCACGAGCTCTATCCAAGCGTCCAGAGCGCGCTGGATTATCACGACGCGTTTACCCTGCTCATCAGCGTTATGCTTTCGGCGCAAACTACTGACGCCGCGGTAAATAAGGTCACACCCGAGCTGTTCCGCCGCTGGCCCGACGCACCGTCCATGGCGGCCGCCAATGCTGTCGAGGTCGGAGAGGTCATCCAGACCATCGGATTCTGGCGCGCAAAGGCCAAGCACTGTGTGGAGACGGCACAGATTCTGCTGACGGAGTACGGCGGAGAAGTTCCAGGCACCATGGAAGACCTGGTCACGCTCCCGGGCGTTGGTCGAAAGACCGCAAACATCGTGCTCAACAAGATGTTTGACGTGGTCGACGGCATCGCGGTGGACACGCACGTGTACAGGATCTCCAAGCGCATTCGCCTGAGCTCGGCTTCCACGCCGCTGGCTGCCGAGAAAGACCTGCTCGCACTTCTCCCCCACGAACTCTGGAAAGACGTCAATGAAGAGTGGATTCACTTTGGGCGAGAAACCTGCACCGCTCGCAATCCCAAGTGCGTCGGCTGTCCCATGAGCGACATCTGCCCTTCCTACGAGCAGCCTAATCGCTGGTTCAAGGGATAA
PROTEIN sequence
Length: 224
MPRESKKVKVERGIELCRRMHELYPSVQSALDYHDAFTLLISVMLSAQTTDAAVNKVTPELFRRWPDAPSMAAANAVEVGEVIQTIGFWRAKAKHCVETAQILLTEYGGEVPGTMEDLVTLPGVGRKTANIVLNKMFDVVDGIAVDTHVYRISKRIRLSSASTPLAAEKDLLALLPHELWKDVNEEWIHFGRETCTARNPKCVGCPMSDICPSYEQPNRWFKG*