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L1_008_000G1_scaffold_81_55

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(63335..64231)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 298.0
  • Bit_score: 596
  • Evalue 1.70e-167
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 298.0
  • Bit_score: 532
  • Evalue 4.60e-149
tRNA pseudouridine synthase A n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7W7_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 298.0
  • Bit_score: 532
  • Evalue 1.60e-148

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Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGAACTCAGAAACATCACAAAACATTGCATCAAATTGCAGTTTTGATGCATGCGAGGAGGCTTCGGCTGAGCCTTCAGCTCCTGAGACTCTCGTTGAAGCTCCTTCTGAGCCTGAAGCTACACTTGTTATCCAGCTAGGTTATCGCGGTGCTGCATTCTGCGGCTTTGCCGAGCAGCCCACCCAGCGCACCGTGGCAGGAGACCTTCGTCGCGCGCTTCAGACCGTCTTGCGCAGAGAGGTCGAGCTCACCTGCGCAGGCAGAACCGACGCCGGCGTGCACGCCCAGGCCCAGTACGTGAGCCTTCCTGTGTACGGCGCTGAGCTGGCGCTGTCTGGCGAGAAACTCGTCCGCTCGCTTACCGCTCTGACCGACGACGACATCTCTATCCGACAACTCTTCCGTGCCCCACAGGGTTTCTCGGCACGCTTTGATGCCCAGGCTCGCTCGTATCGCTATCGCATTTGTGCAGGTAGCGCTCGTCCCGTGCTGGGCTGGGACCACGTGTGGTGGTACAACGGCCACTTGGACGCAGAGCTTATGGACAAGGCGGCGCAGGCGCTGGTGGGAGAGCATGATTTCAAGAGCTTCTGCAAGGCAATTTCTGCCGAGGGTAAGCCAACGCATCGTTTTGTGGAGTGCCTTACCGTTGAAGAAATTGAAGAGGCTGGCGAGAAACTCATTGCAGTTGATATTACGGGCAACGCCTTCTTGCATAACATGGTGCGCACGATTGTGGGCACGCTGGTTGAGATTGGCCGAGGTCACAGGCCTGTTGAGTGGATCGACGAGGTTCTAGCCGCCCAGAATAGAATTGCTGCTGGCAGTTGTGCGCCTGCTCAGGGCCTTACGTTTGTGAGCGTTCGCTATCCAGAGGGCGTTTTGCAACCCTGGTAG
PROTEIN sequence
Length: 299
MNSETSQNIASNCSFDACEEASAEPSAPETLVEAPSEPEATLVIQLGYRGAAFCGFAEQPTQRTVAGDLRRALQTVLRREVELTCAGRTDAGVHAQAQYVSLPVYGAELALSGEKLVRSLTALTDDDISIRQLFRAPQGFSARFDAQARSYRYRICAGSARPVLGWDHVWWYNGHLDAELMDKAAQALVGEHDFKSFCKAISAEGKPTHRFVECLTVEEIEEAGEKLIAVDITGNAFLHNMVRTIVGTLVEIGRGHRPVEWIDEVLAAQNRIAAGSCAPAQGLTFVSVRYPEGVLQPW*