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L2_013_122G1_scaffold_1948_4

Organism: dasL2_013_122G1_concoct_36_fa

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: 2528..5818

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 1096.0
  • Bit_score: 2156
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Veillonella atypica KON RepID=L1PNX3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 1096.0
  • Bit_score: 2156
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 1098.0
  • Bit_score: 1857
  • Evalue 0.0

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Taxonomy

Veillonella atypica → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3291
ATGGATACTTCAATTGACACACTGCTTTCACAAAACCCATCTATGACAGATGGGCTAAAGGCGTTTCGCCAAAAGGGAAAGTCAGTTATATATGGTTTAAGTGGATCACAAAAGTCATTCCTCTTAAGCCGTGCTATTCCAGAGGAACAAGTACAATCTATTATTATCGTGGTGCACGATAAAGAACATAAAGAATTGTGGGAACGGGATTTGGCGTTTTTCTGGCCTAATGTGCAGGTATTGCCGTTTCCTATTACAGAACGTGTAGAATTTACTACCGTAGCTCGTAGCCTTGAAGGACAAGGGGCTCAAATGCGAGCGCTCAGTATGTTGGCCTGGAATCGTCCTGTTGTAGTCCTCGCTACAATAGAAGAGGCCACGCAATATGTAGTGAGTCCTCAATATGTTATATCTCAAAGTGTGCATCTTGAGGTTTCTCAATCTATAGAGCGAGATGAGCTGTTAGAAAAATTAGTTAAAATTGGATATGAACGCGTAGACCAGGTAGAACAACGTGGTCATTTTTCTGTGCGCGGAGATATTTTTGATATCTTTCCTGTGAATAGTGATGATCCAATACGTATGGAATTCTTTGGCGATGAAATCGACACGATGCGCCATTTCTCCGTAGATACACAACGATCTATCGAAATGGTAGATGCCTATACGGTAACACCATTCTTCTTAACCAGCGATGACGCAGATAGTACATTGCTATCTTATGCAAAGGATGGACTTATCATTTATGATGAACCGGTGCGCATTCAAGAAGCGTTGAAGAAATTCTTAAAAGAAGATGCAACACATCGCAAGCAACATTGTGAATGGTCTGAATTACAACGCTCTGTAGAGGCTAAGATTGAGGTGGCTTTCACATTCATGCAACAGCGTTCTATAGGGCTAGCTGGATTTTATCCGATTGGCATTCAAGGCAAAACGATGACGAGCTTTGAGCGTCAAATTCCATTGTTGATGGATGAAATCAAGCAGTGGCAAAAGCTGGGCAATCAAGTTGTGCTTGTGATTAATAATTTGCAGCGCCGTGAAGGCATAGAAAAGGCTTTGCATGGTGATGCCATTCCGTATAAGCTTTGTGAAAGCTGGGATTTTGAGCCTAATACGGTTCACGTTATGCAAGGCTTATTAACTGATGGCTTTGAATTACCGCATAGCCATTTAGTCGTCGTTGTAGAAGGCAATATTTACGGGCAGCAAAAACGCAAACTTCGCAATAAGCCTAAAAAAGGCCAAGAAATTAATTATTTTACGGATTTATCGGTCGGCGATTACGTTGTTCACAGCATGCATGGTATCGGTAAATATGTGGGCTTAAAAACGATTGAAACAGAAGGTATCCATCGAGACTACATTGAAATTGCTTATGCTGGAACAGATAGACTGTATTTGCCTGCTAGTAATTTAGATCAATTGCAAAAGTATATCGGCAATGAAGGCGATGTACCTCGCATTCATAAGATGGGTGGTAGCGATTGGCGTAAAGCGGTTACAAAGGCACAGAAATCCATTGATGATTTGGCGGATAAGCTAGTTGAACTGTATGCGAAACGGGAAATTACAGAAGGATTTGCGTTCTTGCCAGATCAACCGTGGCAACAAGAATTTGAAGATGCCTTTCCTTATGAGGAAACAGAGGACCAATTACAAGCTACGCGAGAAATTAAAGAATCCATGGAACGACCAACACCGATGGATCGCTTGTTAGCGGGGGATGTGGGCTTTGGTAAAACAGAGGTCGCTATGCGTGCCATCTTTAAGGCCGTTGTGAGCGGTAAGCAAGTGGCCGTATTGGTACCAACTACTGTATTAGCTCAGCAACATTACCAAACGTTTTTAAATCGATTTAATCCATTTGGTGTAAAGGTAGATGTACTCAATCGATTCCGTTCTACAGCGGAGAAGAAAGAGGTGCTAAAGGGCGTCGAAAATGGTTCTATCGATATCTTAATCGGCACGCATTCCTTGTTAAATAAAAAGGTAAAATTCAAAGATTTAGGGTTCCTCGTCGTCGATGAAGAGCAACGCTTTGGCGTAGCACAAAAGGAAAAATGGAAGGAATGGGCTAGTAATATTGACGTCCTTACCTTAAGTGCGACACCTATTCCACGGACACTTCATATGTCTCTTGTAGGTGTTCGTGAAATGTCGGTCATTAGTACACCTCCAGAGGATCGACTACCAGTACAGACCTATGTAGTAGAATACGATATGAATCTCATAGCTGATGCAATTAAACGAGAACTTGCTCGAGGGGGACAGGTTTACTTCGTGTATAATCGGGTAGCATCGATTAATCATATGGGTGAACTATTAGAACAGGCGTTGCCAGATTTGCGTTATGCTGTTGCACATGGACAGATGACAGGCCGTCAAATCGAAGAAATTATGACCGATTTCTATGAAGGTCATTATGATGTATTGCTCAGTACAAGCATCATTGAAACAGGCCTTGATATACCAAATGCTAATACGATTATCATATACGATGCGGATCGTTTAGGCTTATCTCAACTCTATCAAATGCGTGGCCGTGTAGGTCGGTCTAGACGACGCGCCTATGCATATTTCATGTATCGACCTGATAAGATGCTTTCAGAAGCGGCAGAAAAACGTTTGAAAGCCATCGAAGAGTTCACTGAATTAGGGGCAGGATTTAAACTGGCTATGCGCGATTTGGAAATTCGTGGGGCTGGTAATCTATTAGGTTCACAACAACATGGTAATATCGCATCAGTCGGCTTTGGCATGTATGTATCTATGTTAGAGGAAGCCATTGCGAAAGCACAAAATAAAGAGGTTATCAAAGAGGTAGTACCAGATCCTGCCATTGACCTTGAAATCGATGCTTTCATAGATGATGCCTATATCAAGGATAGTGCGCGCAAGATTTCCGTATATCAACGGATGTTACAAATCAAGAATAAAGCGCAGCTTGATGATTTGACGGATGAACTTATCGACCGTTTTGGTACACCAACGGATCCGGTAGATCGTTTACTACGAGTCGCTCAAATTAAGGAACAGGCTCGTTTGTTGGGGATTAAGAGCATCGTTCGTCGCGATGGTCAGCTCATCATCCATTGGCAAGATGATTCAAAAATGGCCGATTGGGATATGGGTGCTGTTCGCGAAGATTTATGGAAGAAAATGAAGTTCATGGATACAAAACCGGCGTCATTATATATTAGTTTGAATGGATTAAAGGGATCTATTTTAACGATTACAGAAGCGGTGATGAAGGAGTTGTCAAAGAAATCTAAGGGGGGCCTATGA
PROTEIN sequence
Length: 1097
MDTSIDTLLSQNPSMTDGLKAFRQKGKSVIYGLSGSQKSFLLSRAIPEEQVQSIIIVVHDKEHKELWERDLAFFWPNVQVLPFPITERVEFTTVARSLEGQGAQMRALSMLAWNRPVVVLATIEEATQYVVSPQYVISQSVHLEVSQSIERDELLEKLVKIGYERVDQVEQRGHFSVRGDIFDIFPVNSDDPIRMEFFGDEIDTMRHFSVDTQRSIEMVDAYTVTPFFLTSDDADSTLLSYAKDGLIIYDEPVRIQEALKKFLKEDATHRKQHCEWSELQRSVEAKIEVAFTFMQQRSIGLAGFYPIGIQGKTMTSFERQIPLLMDEIKQWQKLGNQVVLVINNLQRREGIEKALHGDAIPYKLCESWDFEPNTVHVMQGLLTDGFELPHSHLVVVVEGNIYGQQKRKLRNKPKKGQEINYFTDLSVGDYVVHSMHGIGKYVGLKTIETEGIHRDYIEIAYAGTDRLYLPASNLDQLQKYIGNEGDVPRIHKMGGSDWRKAVTKAQKSIDDLADKLVELYAKREITEGFAFLPDQPWQQEFEDAFPYEETEDQLQATREIKESMERPTPMDRLLAGDVGFGKTEVAMRAIFKAVVSGKQVAVLVPTTVLAQQHYQTFLNRFNPFGVKVDVLNRFRSTAEKKEVLKGVENGSIDILIGTHSLLNKKVKFKDLGFLVVDEEQRFGVAQKEKWKEWASNIDVLTLSATPIPRTLHMSLVGVREMSVISTPPEDRLPVQTYVVEYDMNLIADAIKRELARGGQVYFVYNRVASINHMGELLEQALPDLRYAVAHGQMTGRQIEEIMTDFYEGHYDVLLSTSIIETGLDIPNANTIIIYDADRLGLSQLYQMRGRVGRSRRRAYAYFMYRPDKMLSEAAEKRLKAIEEFTELGAGFKLAMRDLEIRGAGNLLGSQQHGNIASVGFGMYVSMLEEAIAKAQNKEVIKEVVPDPAIDLEIDAFIDDAYIKDSARKISVYQRMLQIKNKAQLDDLTDELIDRFGTPTDPVDRLLRVAQIKEQARLLGIKSIVRRDGQLIIHWQDDSKMADWDMGAVREDLWKKMKFMDTKPASLYISLNGLKGSILTITEAVMKELSKKSKGGL*