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L2_013_122G1_scaffold_2362_1

Organism: dasL2_013_122G1_concoct_43_fa

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(3..1010)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 336.0
  • Bit_score: 637
  • Evalue 9.60e-180
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=2 Tax=Haemophilus parainfluenzae RepID=I2J779_HAEPA similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 336.0
  • Bit_score: 637
  • Evalue 6.90e-180
23S rRNA (uracil-5-)-methyltransferase similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 336.0
  • Bit_score: 635
  • Evalue 5.70e-180

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Taxonomy

Haemophilus parainfluenzae → Haemophilus → Pasteurellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGGCTTTACTTTACGCTCCACAAAAAAAACAGAAAATCACGCAAAAAATCGTCGCTGAAATTCAGGATTTAGATTATCAAGGGCTAGGTGTCGCCAAAATTCAAGGTAAAACCTGGTTCATTGAAAATGCTTTACCAACGGAAAAAGTGGAAGCGGTAGTGACCGATGAAAAACGTCAATATGGATTAGCGACTGCACAAAAATGGCTACAAGAGAGTAATCAGCGAGTTGAGCCACAATGTCGTTATTATGGGCGTTGTGGTGGCTGCCAAGGTCAGCATATTCCGGTGGAAATGCAACGTAAAGCGAAAGAGAACGCCCTTTTTTCTCGTTTAAGTAAACTGCAAGCAGAGCCCATTCAATTAATGCCCATGATTTGTGGCGAACAATGGGCTTATCGTCGTCGAGTACGATTAAGTTTACTGTGGAATGCTAAAAACAAAACCGTTGAAATGGGATTTCGTCAGAAAAACTCCAATCAGTTAGTCAGCATTCAGCAATGCTTAGTCGCAGAGCAAGCAATCAATGATCCTATCCCCAAATTGACCGCACTTTGGGCGCAATATTCAGCCCCGAAACAATTAGGGCACATTGAATTAGTTTCAGCAGAGAATGGCGTAGGCATGTTATTACGCTATAAAGGAAATTTAACTGAAACTGATCGCACTTTGTTGCTCGAGTTTGCTCGTGTAAATGCCGTAAATTTGTTTTTACAAGATGATCAAAGTATTCAACTTGTGCATGGTGAAATGCCTTATTATGCATTAAATGGTATTCGTTTATCTTTTGATATTCGCGATTTTATTCAAGTGAATACCCACTTAAATCAGCAAATGGTTAAGACTGCTTTAGATTGGCTTGATTTGAATCAGGATGATCATGTCTTAGATTTATTCTGCGGCATGGGCAATTTCACGTTGCCTTTAGCCAAATGTGTGAAAAGTGCGGTTGGAATTGAAGGTGTTTTTGATATGGTTCAAAAAGCCCAATCGAATGCACAGTTTAAT
PROTEIN sequence
Length: 336
MALLYAPQKKQKITQKIVAEIQDLDYQGLGVAKIQGKTWFIENALPTEKVEAVVTDEKRQYGLATAQKWLQESNQRVEPQCRYYGRCGGCQGQHIPVEMQRKAKENALFSRLSKLQAEPIQLMPMICGEQWAYRRRVRLSLLWNAKNKTVEMGFRQKNSNQLVSIQQCLVAEQAINDPIPKLTALWAQYSAPKQLGHIELVSAENGVGMLLRYKGNLTETDRTLLLEFARVNAVNLFLQDDQSIQLVHGEMPYYALNGIRLSFDIRDFIQVNTHLNQQMVKTALDWLDLNQDDHVLDLFCGMGNFTLPLAKCVKSAVGIEGVFDMVQKAQSNAQFN