ggKbase home page

L2_013_122G1_scaffold_1577_4

Organism: dasL2_013_122G1_concoct_43_fa

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(3329..4297)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=888828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae ATCC 33392.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 322.0
  • Bit_score: 625
  • Evalue 2.10e-176
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Haemophilus parainfluenzae ATCC 33392 RepID=F0EUR5_HAEPA similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 322.0
  • Bit_score: 625
  • Evalue 1.50e-176
S-adenosyl-dependent methyltransferase similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 319.0
  • Bit_score: 623
  • Evalue 2.80e-176

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haemophilus parainfluenzae → Haemophilus → Pasteurellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGACTACGCAAAATTCTTTTTCTGCACCTGAACATATCACGGTTTTGCTTCACGAAGCGGTGAATGGTTTGGCGTTGAAAGAAAACGGAATTTATATTGATGGTACCTTTGGTCGTGGTGGTCATTCTCGTCTAATTCTCTCTCAGCTTTCTGAAAATGGTCGTTTAATTGCCGTTGATCGTGATCCTCGTGCGATTGCTGAAGCTGAAAAAATTCAAGACCCTCGTTTTCATATTGAACATAATAGCTTTTCACACATTCCAGATATCTGTCAAAAACTCGATTTAGTTGGTAAAATTGACGGTATTTTGCTGGATTTAGGCGTATCATCTCCACAGCTTGATGAAGCAGAGCGTGGTTTCAGTTTTATGAAAGATGGCCCATTAGATATGCGCATGGATACCACACAAGGTTTATCTGCGGCAGAGTGGCTAAAACAAGTATCTGTTGATGATTTAACTTGGGTGTTAAAAACCTTTGGTGAAGAGCGTTTTGCAAAACGAATTGCTACTGCTATCGTTGAATTCAATAAAAGTGCGGTCAAAAATGGCACTGAATGTTTAAGTCGTACTTCTCAACTCGCTGAATTAATTGCTCAAGCCGTACCGTTTAAAGATAAACATAAGCATCCCGCGACGCGTAGTTTCCAAGCCATTCGAATTTATATTAATGCGGAATTAGATGAGTTAGAAAGTGTATTAAATTCTGCATTAGATATGTTGGCGCCAGAAGGGCGTTTATCGATTATCAGTTTCCATTCACTTGAAGACAGAATGGTAAAACATTTCATGCGTAAACAAAGTAAAGGTGAGGATATTCCGAGAGGCTTACCATTACGTGAAGATCAAATCCAACGTAATCAAAAATTAAAAATCATTGGTAAAGCTATTCAGCCTAGTGAGGCAGAAATTTCAGCGAATCCACGCTCAAGAAGCGCGGTGTTACGTATTGCGGAAAGGGTGAAATAA
PROTEIN sequence
Length: 323
MTTQNSFSAPEHITVLLHEAVNGLALKENGIYIDGTFGRGGHSRLILSQLSENGRLIAVDRDPRAIAEAEKIQDPRFHIEHNSFSHIPDICQKLDLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDMRMDTTQGLSAAEWLKQVSVDDLTWVLKTFGEERFAKRIATAIVEFNKSAVKNGTECLSRTSQLAELIAQAVPFKDKHKHPATRSFQAIRIYINAELDELESVLNSALDMLAPEGRLSIISFHSLEDRMVKHFMRKQSKGEDIPRGLPLREDQIQRNQKLKIIGKAIQPSEAEISANPRSRSAVLRIAERVK*