ggKbase home page

L2_013_122G1_scaffold_542_9

Organism: dasL2_013_122G1_concoct_57_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 8778..9050

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8M2_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 188
  • Evalue 3.00e-45
30S ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 188
  • Evalue 8.40e-46
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 188
  • Evalue 4.10e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGGCTCAGCAGAAACAAGATTTCCAGCGCCAGCCGCGTCGCAAGTATTGCCAGTTCTGCAAGGAGGAGACTGAGTTCATCGATTACAAAGATACTCAGCTTCTTCGTAAGTACATGACCGACCGTGGCAAGATTAAGCCTCGTCGCGTCACTGGCACCTGCACGCAGCACCAGCACGACATTGCACTTGCTATCAAGCGCGCACGCGAGATGGCACTTCTGCCCTACACTGTCCCTGTGGTTTCCAGCCGCGGTGGCCGTAGTCGCGGATAA
PROTEIN sequence
Length: 91
MAQQKQDFQRQPRRKYCQFCKEETEFIDYKDTQLLRKYMTDRGKIKPRRVTGTCTQHQHDIALAIKRAREMALLPYTVPVVSSRGGRSRG*