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L2_013_122G1_scaffold_456_10

Organism: dasL2_013_122G1_concoct_57_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 8053..11568

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 1171.0
  • Bit_score: 2310
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W808_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 1171.0
  • Bit_score: 2306
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 1171.0
  • Bit_score: 2306
  • Evalue 0.0

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3516
GTGTCTACCGCTAAAAAGACTTCCCTCACCACGCCTCAGGCGCATACTGGACGCAGGACGTTCAGTAAGATTCCCGCAGCTATGGAGCTGCCAAATCTGATTTCTGTACAGAAGGAATCATTTGAGCGCTTTATGGGAGAGGGCCTTGCAGAGTCCTTCGCTGAGTTCTCGCCAATTGAGAACAGCGCTGGAACCATGCAGGTCACCTTTGGTGACCATCAGTTCGGCGACCCTGCCAATTCAATGGCTGAGTGTCGTGCAAAAGACATTTCATATCAAGCACCTCTTTTTGTTGACGTCCGTTTTGTCAACAAAGAGACTGGTGAGATGAAGGAGCAGCTTGTCTTCATGGGTGATTTCCCACTGATGACTGAGCGCGGTACCTTCATCATCAACGGTTCTGAGCGTGTTGTGGTTTCACAGCTCGTCCGTTCACCTGGCGTGTACTTCTCGTCAGAGATGGACAACGGTGTTCTGGTCCACAAGTCTCAGTTCATTCCTGCACGTGGTGCATGGCTTGAGTTTGAGGTTGATAAGCGCGGCCACCTGGTCGTCTCCATTGACCGCAAGCGCCGCCAAAGCGCTACTGTCTTCCTCCGTGCACTTGGCATTGCTGTTACCGATGACGAGATCCTCTCGCTTCTTGGTGACTCCGATGTTGTTCGCAACACACTTGAGCGTGATGTTGCAACCACACGTGAGGACGCTCTTATCGAGATTTATCGTCGTCAGCGTCCAGGCGAGCCACCAACTGTTGACTCTGCCCGTTCTCTGCTTGACGGCCTCTTCTTCAACGAGCAGCGCTATGACCTTGCTCGCGTTGGTCGTTACAAGATCAACAAGAAGCTTGAGGAAGAGATTCCTGCAGACGTTCGTGTCCTTACCAAAGAGGACATTGTCGCAGCTCTTCAGTACCTTCTTGCAGTTCATGCAGGTGATGAGTCTAAGCACCTTGATGACATTGACCACTTTGGCAACCGCCGCGTCCGTACCGTTGGCGAGCTGGTCCAGAACCAGTTCCGCATTGGTATGAGCCGCATGGAGCGCGTTGTTCGTGAGCGCATGGCATCTCAGGACGCAGACGACATCACTCCACAGTCTCTGATCAACATCCGTCCAATTGTTGCTGCAATCAAGGAGTTCTTCGGTTCTTCTCAGCTTTCGCAGTTCATGGACCAGGCAAACCCACTTGCTGGTTTGACCCACAAGCGTCGTCTTTCTGCTCTGGGACCTGGCGGTCTTGCAGGACACAAGTCCGGCTCCAGCCGTCGTACCAACGTTCCTACCGCAGTCCGCGACGTTCATAACTCGCACTACTCCCGTATGTGCCCAATCGAGACTCCTGAGGGACCAAACATTGGTCTTATCGGCTCTTTGGCACTGTACGCTCACGTAAATGAGTACGGCTTTATCGAGGCTCCTTATCGTAAGGTCACGGACGGCGTTGTCTCTGACGACATCGTTTGGATGACTGCAGACGAGGAGGAGAATCACATTATTGCTCCTGCTAACACCCCAATTGACCCTAAGTCTAAGAAGTTTGTTGAGGTTGACGCAGACGGCAAGATTGTTAATGCAGACCGCGTTATTGCACGTACCCGCGACTTCGACGGTTCCTTCGGTGCACCTGCACAGGTTCCTGTTGAGGACGTTGACTACATGGACGTTTCTCCACGTCAGCTTCTCTCCGTCGCAGCTAACCTCATTCCATTCCTTGAGCACGACGATGCAAAGCGTACCCTCATGGGTGCAAACATGCAGCGTCAGGCAGTGCCTCTGATCCAGTCCCACGCTCCATTTGTTGGAACTGGTATGGAGGGTCGCGCAGCTCAGGACTCTGGCGAGCTTATTTGCGCAGAGTTTGCCGGCGAGGTCACCGAGGTAGACGCAGCTCACGTTGTCATCTACTCCGATGAGCACGGTTCTCAGCGCTACGATCTTCCTAAGTACGAGCGCTCCAACCAGTCCACGTGCATCAACCACCGTCCAATTGTCACAGTTGGACAAAAGGTCGAGAAGGGCCAGCCAATTGCAGACGGTCCATCTGTTGACCACTCTGAGCTGGCGCTTGGTGCAAACCTTACCGTTGCTTACATGCCATGGGAAGGCTACAACTACGAGGACGGTATTATCGTCTCCGAGCGTGTTGTTCAGGAAGACCTTCTGACCTCCGTTAACATTTCCCGCCACGAGATTGATGCTCGTGACACCAAGCTTGGTGCTGAGGAGATTACCCGCGAGATTCCAAACCTTGGTGAGGACATGCTTGCAAACCTCGACGATGACGGTATCATTCGCATCGGCGCTGAGGTTGGCCCTGGCGATATTCTGGTTGGTAAGGTCACCCCTAAGGGCGAGACTGCTCTGACCGCAGAAGAGCGCCTGCTTCGCGCAATCTTCGGTGCTAAGGCACACGATGTTCGCGATACGTCCCTTAAGATGCCACACGGCTCCTATGGCCGCGTTGTTGACGTTGTCCGCTTCAGCCGTGAGGCTGGAGACGACCTGCCTCCAGGAGTAAACGACCTGGTCCGCGTCTTTGTTGCTCAGCGCAGAAAGATCCAGCAGGGCGATAAGATCGCTGGTCGCCATGGTAACAAGGGTGTTATTTGTAAGGTTCTCCCTGTTGAGGACATGCCTTACATGGCAGATGGTACCCCAGTAGACGTTATTCTCGACCCACTGGGCGTTCCTTCCCGTATGAACGTTGGTCAGCTGCTTGAGTGCCACCTTGGCTGGGGCGCTGCACATGGTTGGGATGACGATGACGCAGATTCCAAGCGTTACGTTGAGGGCCCAATCCCTGTTGCAACACCACTCTTTGACGGTGCTACTGATGAGTCCGTTGCAGAGATTGTTCGCCGCACCAACATCAACATGATCAACAAGGCTCTCAAGGAGTACGGCGAGAACATGCGTGAGGAGTTTGTTCCACAGCTCAACGAGCGTGGTAAGACTACCCTCTACGATGGTCGTACCGGTGAGGCTTTCAAGAGCCCAATTACCGTTGGTGTTTCTTACATTCTGAAGCTCGGCCACATGGTTGACGATAAGATCCACGCACGTTCAACTGGTCCTTACTCTCTTGTTACCCAGCAGCCTCTGGGTGGTAAGGCACAGTTCGGCGGTCAGCGCTTTGGTGAGATGGAGGTTTGGGCACTGTATGCATACGGTGCTGCTAACGTCCTCCAGGAGATCCTCACCGTTAAGTCTGACGACACCAACGGCCGTGTTAAGACCTACGAGTCCATTGTTAAGGGCGAGAACATTCCTACTGCAGGAATTCCTGAGTCCTTCAAGGTTCTGGTCAAAGAGATTCGCTCCCTGGCACTTGACATTGAGCCAATCTCCTACCGTAAGCGTGCAAATACCGCAAAGGTCACAGATCCTGAGGAGAAGAACGCTGTTGAGATCCTCAACGACCTTGGCTTCACTGAGGTAACCGCTTCCGACCTGTCCCAAGACGCTGAGGGTGCATCCGCACTTGTAGGCGACGCGACCACCGATAAGGAGTAG
PROTEIN sequence
Length: 1172
VSTAKKTSLTTPQAHTGRRTFSKIPAAMELPNLISVQKESFERFMGEGLAESFAEFSPIENSAGTMQVTFGDHQFGDPANSMAECRAKDISYQAPLFVDVRFVNKETGEMKEQLVFMGDFPLMTERGTFIINGSERVVVSQLVRSPGVYFSSEMDNGVLVHKSQFIPARGAWLEFEVDKRGHLVVSIDRKRRQSATVFLRALGIAVTDDEILSLLGDSDVVRNTLERDVATTREDALIEIYRRQRPGEPPTVDSARSLLDGLFFNEQRYDLARVGRYKINKKLEEEIPADVRVLTKEDIVAALQYLLAVHAGDESKHLDDIDHFGNRRVRTVGELVQNQFRIGMSRMERVVRERMASQDADDITPQSLINIRPIVAAIKEFFGSSQLSQFMDQANPLAGLTHKRRLSALGPGGLAGHKSGSSRRTNVPTAVRDVHNSHYSRMCPIETPEGPNIGLIGSLALYAHVNEYGFIEAPYRKVTDGVVSDDIVWMTADEEENHIIAPANTPIDPKSKKFVEVDADGKIVNADRVIARTRDFDGSFGAPAQVPVEDVDYMDVSPRQLLSVAANLIPFLEHDDAKRTLMGANMQRQAVPLIQSHAPFVGTGMEGRAAQDSGELICAEFAGEVTEVDAAHVVIYSDEHGSQRYDLPKYERSNQSTCINHRPIVTVGQKVEKGQPIADGPSVDHSELALGANLTVAYMPWEGYNYEDGIIVSERVVQEDLLTSVNISRHEIDARDTKLGAEEITREIPNLGEDMLANLDDDGIIRIGAEVGPGDILVGKVTPKGETALTAEERLLRAIFGAKAHDVRDTSLKMPHGSYGRVVDVVRFSREAGDDLPPGVNDLVRVFVAQRRKIQQGDKIAGRHGNKGVICKVLPVEDMPYMADGTPVDVILDPLGVPSRMNVGQLLECHLGWGAAHGWDDDDADSKRYVEGPIPVATPLFDGATDESVAEIVRRTNINMINKALKEYGENMREEFVPQLNERGKTTLYDGRTGEAFKSPITVGVSYILKLGHMVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALYAYGAANVLQEILTVKSDDTNGRVKTYESIVKGENIPTAGIPESFKVLVKEIRSLALDIEPISYRKRANTAKVTDPEEKNAVEILNDLGFTEVTASDLSQDAEGASALVGDATTDKE*