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L2_013_122G1_scaffold_2541_5

Organism: dasL2_013_122G1_concoct_57_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(3324..5336)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 670.0
  • Bit_score: 1270
  • Evalue 0.0
VacB and RNase II family 3'-5' exoribonuclease (EC:3.1.13.1) similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 670.0
  • Bit_score: 1261
  • Evalue 0.0
Ribonuclease R n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8A8_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 670.0
  • Bit_score: 1261
  • Evalue 0.0

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2013
TTGGCTAGAAAACGCATACATAAAGGAAACCGTCGTCAGGGACGTGCAAAAGTCTCAAAGCGACCATCGGCGTTGCTTACAGGCACGCTGAGTCTTTCTCGCCCAGGAGTTGCTACCGTAAGCACCCCTGAGGGTACGTATGCGCTGGCCAAGCACGGGATTCATGAGGCAATGCACGGAGACGAGGTCCAGGTTTCGCTTGTGTCTGCCAAGGGAAAGACTCCTCTGGCAAACGTGCGTTTTGTGCTTACGCGAGCTACTCAGACGTTTTTGGGTATCTACCATGACGCCGGTCCACTTGGCGCTGTGGTGCCGCTGGATAGTCGCATCCAGCGAGATTTCTTTGTGCTTCCCGAAGATCCTTCTGTTGGGCGTCATTACGTTTTTGAGGGTGACGTAGTAGTTGCGCGCATTACAGAGTATCCAACGCGCAAAAGTGCTGCTGTGGTTACTATCGAGCGTCGCGTGGGCTCTGCCGAAGATCTGGACATGAACGTTGAGGCAACTATTGCTTCATATGGCCTGGCAACAGAATTTCCTATCAAGGCGCTTAGACAGGCCGAGAAAATCTCCGTTGACGCAGATAAAGCGCTTGCAGAAGACGTCTCAAGACACGATTTGCGAGAAAATCTGTGTATCACCGTAGACCCCGCGGATGCTAAAGACTTTGATGACGCCGTTGGTGCGTGCAAGCTTGAAGACGGTGGCTTTGAGCTGTGGGTTCATATTGCAGACGTGGCTCACTATGTAAAATGGGATTCTCCCATTGACCTGGAAGCTCGCATGCGCACCTGCTCGGCATATTTAGTTGACCGCGTGTTACCTATGCTTCCAGAGAAACTCTGCAACGACGTTTGTTCTTTGCGACCAGCTGAAGATAGGCTGGCCATGTCGATAAAGATGACTTTGAGCAGCTCGGGCAAGATCCTTGGGGTAACCGCCATGAATTCCGTTATTCGCTCACGAGCAAGACTCAGCTACGACCAGGTAGATAGCTATCTCCAAGGAGATGCTGCGGCACTTGACTCGGCTATTTCTGCAGAAGACGCTGGCGCAATCAAAGAAATGATTGGCGTGCTCAATCAAATCCGTGCACTGAGAGAAGAAATTCGCGAGAAACGCGGCTCAGTAGATTTTGAGAGCGTGGAAACACGCGTAGTACTTGACGAGAATAACAAGCCAGTTGGCGTCTCGGTGCGAGAGCGCACTCAGGCAACGGGGCTTATCGAGGAAGCAATGCTCGCGGCTAATGAGAGCGTTGCGCATATGCTCAGCCAGCACGACCTTGAGTCAGCATATCGAGTGCATGAGCAGCCTTCGCCAGAGTCACTCAAGCTTGCGGTTACTCCGCTTGTAGCTATGGGGGCACTTGAGCCAGACGTTGCGTCTCGTATTGCCATTGGCGACCAGACCGCGCTGCAAGAAGCGCTGGAGTCAGTGCATGGCACACGTTATGCTCGCGTGGTAAATGCGCAGCTGCTCAGGGCCCAAAAACGAGCAATTTATTTGCCAACTAATCAGGGACACTTTGCTCTGGGAGCGGATGCGTACTGTCACTTTACCTCGCCAATCAGGCGCTATCCCGACGTGATAGTACATCGTACGCTCAAGCGTTTGCTCCGCGGACAGACGGCGTCTCACGCAGAGCTCAGCGCGCTTCCAGATATCTGTAGTACCTGCTCTGAGCAGGAGCGCAAGGCAGATGCGGCAGCTCGTGCTACGCAAAAGATTAAGCTGGCCGAGTACTATCAGAGCCGTCTGGGAGAAGAAACGTGGGGAACCATTGACGGCTGCGAGCGCTTTGGCCTGTTCATTACGTTGGACGGTACCTACGCCGACGGTCTTCTCGCCGTGAGGGACTTGGACCACGAATGGTATGTGTATGACCAGGAGACGCTGGCGCTAATAGGGGAATCAACAGGCAAAACGTATCGGATTGGCGGGCGTGTACGCGTGAAGATTTCTGGCGTAAATGTGGCTCGTGGTCAGATTGATTTGGCACTTGTGGAATAA
PROTEIN sequence
Length: 671
LARKRIHKGNRRQGRAKVSKRPSALLTGTLSLSRPGVATVSTPEGTYALAKHGIHEAMHGDEVQVSLVSAKGKTPLANVRFVLTRATQTFLGIYHDAGPLGAVVPLDSRIQRDFFVLPEDPSVGRHYVFEGDVVVARITEYPTRKSAAVVTIERRVGSAEDLDMNVEATIASYGLATEFPIKALRQAEKISVDADKALAEDVSRHDLRENLCITVDPADAKDFDDAVGACKLEDGGFELWVHIADVAHYVKWDSPIDLEARMRTCSAYLVDRVLPMLPEKLCNDVCSLRPAEDRLAMSIKMTLSSSGKILGVTAMNSVIRSRARLSYDQVDSYLQGDAAALDSAISAEDAGAIKEMIGVLNQIRALREEIREKRGSVDFESVETRVVLDENNKPVGVSVRERTQATGLIEEAMLAANESVAHMLSQHDLESAYRVHEQPSPESLKLAVTPLVAMGALEPDVASRIAIGDQTALQEALESVHGTRYARVVNAQLLRAQKRAIYLPTNQGHFALGADAYCHFTSPIRRYPDVIVHRTLKRLLRGQTASHAELSALPDICSTCSEQERKADAAARATQKIKLAEYYQSRLGEETWGTIDGCERFGLFITLDGTYADGLLAVRDLDHEWYVYDQETLALIGESTGKTYRIGGRVRVKISGVNVARGQIDLALVE*