ggKbase home page

L2_013_122G1_scaffold_2569_1

Organism: dasL2_013_122G1_concoct_57_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(2..979)

Top 3 Functional Annotations

Value Algorithm Source
Radical SAM methylthiotransferase, MiaB/RimO family {ECO:0000313|EMBL:EWC95540.1}; EC=2.1.1.- {ECO:0000313|EMBL:EWC95540.1};; EC=2.8.1.- {ECO:0000313|EMBL:EWC95540.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 326.0
  • Bit_score: 632
  • Evalue 3.00e-178
RNA modification enzyme, MiaB family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W6Y4_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 326.0
  • Bit_score: 618
  • Evalue 3.20e-174
MiaB family RNA modification protein similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 326.0
  • Bit_score: 618
  • Evalue 9.10e-175

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGGCTCATGGTATTGCGCTCATAAATCTTGGATGTAGGGTAAATCGCGTTGAGCTTGATTTAATGGCGGATTCTCTGCTCCGCATGGGATGTCGCATTGTTGAAGAAGATGAAGCTCAGGCAATTGTTATCAACACATGTGCTGTAACCGCAGAAGCAGAAGCTAAGACGAGAAAAGCTGTGCGTAAAGCAGCGCTTATGCCAGGAGCCCCTCTTGTAGTGGCAACAGGTTGTGTTGCAAGTCTTTTTGCTGACGAGCTTGCCTCTCTTGCTCCTAACGTTGTGGTAGAAGCCGAGAAAGACAAAGTTGCAGATAGAGTTCTTGAAGAGCTAGGCTTTGCTCCAGAATCCGTAAGTGACGACGGTCTTGTCATCTCCAAGCCAACTCCAACAGGTCGCACACGCCCTGGTATCAAGATTCAAGACGGTTGCGATAATCGTTGTACCTTCTGCATTGTCTGGAAGGCGCGCGGTGCGGGAAAATCCCTTGATCCTCGTGAGGTTGTTTCGCAGGTAAAAGATGCTATGAGCAGAGGAGCTCAAGAGGTTGTTCTTACGGGAATTAATCTTGGTAGCTATAAGGCTCAACTTGAGGATGAGGGCAAGAAGACCTTCAGGCTCCCAGACCTTCTCGAGTATGTGCTTGAAAAAACAGAGGTAGGCCGCCTCAGGCTTTCTTCTCTTGAGCCACCTGATGTAAATGCTCGTTTAGTAGAGGTTATTGCTGCTTCCAACGGAAGAATTGCACCTTTCTTGCACATCTGCCTTCAGTCCGGATGTGACGCTACGCTTGCTCGTATGGGCAGGGTGTATAGGACAGAGCTTTATCGCAAGGCTGTTGAGGAAGCTCGTTCGGTACTGCCAACCATTGCTTTAGGAACGGACCTTATTGTTGGTTTCCCTGGAGAAACTGATAAAGAATTTGAAGAGTCGTTTGAGTTTTGTCGTCAGATAGGCTTTTCAAAGATGCACGTATTT
PROTEIN sequence
Length: 326
MAHGIALINLGCRVNRVELDLMADSLLRMGCRIVEEDEAQAIVINTCAVTAEAEAKTRKAVRKAALMPGAPLVVATGCVASLFADELASLAPNVVVEAEKDKVADRVLEELGFAPESVSDDGLVISKPTPTGRTRPGIKIQDGCDNRCTFCIVWKARGAGKSLDPREVVSQVKDAMSRGAQEVVLTGINLGSYKAQLEDEGKKTFRLPDLLEYVLEKTEVGRLRLSSLEPPDVNARLVEVIAASNGRIAPFLHICLQSGCDATLARMGRVYRTELYRKAVEEARSVLPTIALGTDLIVGFPGETDKEFEESFEFCRQIGFSKMHVF