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L2_013_122G1_scaffold_3980_4

Organism: dasL2_013_122G1_concoct_57_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2217..3071

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9U8_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 284.0
  • Bit_score: 544
  • Evalue 5.10e-152
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 284.0
  • Bit_score: 549
  • Evalue 1.70e-153
sigma-B/F/G subfamily RNA polymerase sigma-28 factor similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 284.0
  • Bit_score: 544
  • Evalue 1.50e-152

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Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGCCTAAACCTGAAGCAAACGAGGCAGTACAGGCATCTGCAGAAGAGCAGAAAGCCGCAAGAAGAGCTGCTCGTCGTGCTTCTAAAGGTACCCCAGCCTGGGATAAAGATAGAACACGCCAGCTCTTTGCCCAATATAAAGAAACAAAAGATCCTGAGGTAAGAGACCAGCTCATTGTGAGTCACTTAAACCTCGTGCGCTTTTTGGCTTCTAAGTTCAAAAACCGTGGAGAACCCCTTGATGATTTGATTCAGGTGGGAACCATTGGACTTATCAAAGCAATTGATAGGTTTGAGCCTGATCGTGGTCTTGAATTTACAACGTATGCAACGCCAACCATCATGGGAGAAATTAAGCGTCACTTCCGTGATAAAGGCTGGTCAGTACGTGTTCCTCGACGTCTGCAGGAGCTTTCGTCCAAGATCAATCAGGTTACTGATGATTTGACTAAAGAGCTGCAAAGAAGCCCTTCAATTGAAGAGATCGCCCAACGCCTTGACACTAACGTTGAAGAAGTTCTTGAGGCTATGGAGTCTTCTAGCGCTTATAGCTCTGTTCCTCTTGAGGGAGGCGGCTCTGGTGCTGATGGCGACGAGACTCCTTCAATCATTGATCAATATGTGACCGAAGATGAGGATCTTGCTGGTTCTGATGACCGCATTGTTCTTGAAGAGGCCATTAGAGACTTCTCGCCACGAGAGCAAGAGATTATTCGTATGCGTTTTGTTGAAGGTCTTACCCAGGTAGAGATTGCGGAGAAACTTAATATCTCTCAGGTACAGGTTTCAAGGCTGCTTCGTCGCACCTTAAAGCGTATCCAAGAAAAGATTGACCCAGAAAGCGTGAACCGTTAA
PROTEIN sequence
Length: 285
MPKPEANEAVQASAEEQKAARRAARRASKGTPAWDKDRTRQLFAQYKETKDPEVRDQLIVSHLNLVRFLASKFKNRGEPLDDLIQVGTIGLIKAIDRFEPDRGLEFTTYATPTIMGEIKRHFRDKGWSVRVPRRLQELSSKINQVTDDLTKELQRSPSIEEIAQRLDTNVEEVLEAMESSSAYSSVPLEGGGSGADGDETPSIIDQYVTEDEDLAGSDDRIVLEEAIRDFSPREQEIIRMRFVEGLTQVEIAEKLNISQVQVSRLLRRTLKRIQEKIDPESVNR*