ggKbase home page

L2_013_122G1_scaffold_4649_1

Organism: dasL2_013_122G1_concoct_57_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(3..410)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MerR family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8U5_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 136.0
  • Bit_score: 266
  • Evalue 9.90e-69
Heat shock protein HspR family protein {ECO:0000313|EMBL:EWC94414.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 136.0
  • Bit_score: 267
  • Evalue 6.20e-69
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 136.0
  • Bit_score: 266
  • Evalue 2.80e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGGCTCGAAAGAAGGATGACGGTCGTAACAAGCCGCTTTACATGATTAGCGTTGCGGCCGAGCTCACGGGCATGCATCCGCAGACGCTTCGCGTGTACGAGCAGAAAGGCCTGATTAACCCCGGCCGTTCCAGGGGCAACACGCGCCTGTACTCTCGTGCGGATATTGACCGCCTCAATCTTGTCTCAAAGTTGACGGACGAAGGCATCAATCTTGCCGGTGTTGTGCGCATTTTGGACATGCGCGAACGAGCTCTCGAGAAGGACGATCTTATTGATGAGCTGCGTGAACGCATCCGCGTGCTTGAGGATGAGCTCCACGAGTATCACATGCGTGAGCGCATTACCTCGCTTGTTCGCTACAGCGAGACCAGCCCAGAGATGGTGATGCAGCGCTTACTGGGCATG
PROTEIN sequence
Length: 136
MARKKDDGRNKPLYMISVAAELTGMHPQTLRVYEQKGLINPGRSRGNTRLYSRADIDRLNLVSKLTDEGINLAGVVRILDMRERALEKDDLIDELRERIRVLEDELHEYHMRERITSLVRYSETSPEMVMQRLLGM