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L2_013_122G1_scaffold_1045_1

Organism: dasL2_013_122G1_concoct_57_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(2..922)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W713_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 307.0
  • Bit_score: 576
  • Evalue 1.30e-161
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 307.0
  • Bit_score: 583
  • Evalue 1.50e-163
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 307.0
  • Bit_score: 576
  • Evalue 3.70e-162

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Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 921
GTGGCTGCAAAAAAGGCAAATGAAGAGGTCAAACTCTCAGATGAGCTTACTAAAATTGTTGATGATCTGGTAAGTTCTTCAAAGTCTAACGGTAGTATCAGCGAAGACGATATTCAGGTTGCCATTCGTGACGTTGACGTTAACGATGATGAGCTTTCTGATCTGTACGATTCGCTGCGCGTTAAAGGTGTAGAAATTACTACCGCATCTGAAGCAACCGTTTCTTTCGCTATTGAAGATGACGCCGTAGAGGATGATTTTTCATCCGATGATGACATGGATGACTCATCTGATTTTGAAGATGAAGATGATGAAGATTTTGATGCCGTAAATGAGGCACGTGAGGTCAAAGAGGCTCTCCGCTCTGTTTCTAAGGCAAAAGTCTCTAAGCCAAAACGTTCTTCTCGCGCTCGTGCTCGTCGCTCAGATACCACCACGGTTATGCTTACCGGCGATCCTGTCCGCATGTATCTTAAAGAGATTGGTAAGGTAGACCTGCTTACTGCATCAGAAGAGGTTCACCTTGCTATGAAGATTGAGGCAGGTACTGCAGCCTCCCAGAAGCTGGAGGACTTTGAGGATGGTCTCATCGAGCTCAACCGTGCAGAGCAGCGCCGCCTCATGCGTATTGAGTCCGTAGGACTTGACGCTAAGCAGCAGCTTATCTCTGCAAACCTTCGTCTTGTCGTCTCAATTGCTAAGCGCTATGTTGGCCGTGGCATGCTGTTCCTCGATCTTATCCAGGAAGGTAACCTGGGCCTTATTCGTGCTGTCGAGAAGTTCGACTACACCAAGGGCTTTAAGTTCTCAACATATGCTACATGGTGGATTCGCCAGGCAATTACCCGTGCTATTGCGGACCAGGCTCGTACCATTCGTATTCCAGTTCACATGGTAGAGACCATCAATAAGCTTATCCGT
PROTEIN sequence
Length: 307
VAAKKANEEVKLSDELTKIVDDLVSSSKSNGSISEDDIQVAIRDVDVNDDELSDLYDSLRVKGVEITTASEATVSFAIEDDAVEDDFSSDDDMDDSSDFEDEDDEDFDAVNEAREVKEALRSVSKAKVSKPKRSSRARARRSDTTTVMLTGDPVRMYLKEIGKVDLLTASEEVHLAMKIEAGTAASQKLEDFEDGLIELNRAEQRRLMRIESVGLDAKQQLISANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIR