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L2_013_122G1_scaffold_1045_4

Organism: dasL2_013_122G1_concoct_57_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(4062..5003)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 313.0
  • Bit_score: 590
  • Evalue 7.40e-166
tRNA pseudouridine synthase B n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W716_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 313.0
  • Bit_score: 558
  • Evalue 2.90e-156
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 313.0
  • Bit_score: 558
  • Evalue 8.20e-157

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 942
GTGAAGCGAGGAGCTAGTGGAATTAACGCACTTATTGCTGTTGACAAACCGCTTGGGCTGACCAGCCATGACGTGGTTTCTCGCGTTCGCCGTGCATTTGGCGAGAAACGCGTGGGACATGCAGGCACTTTGGATCCTAATGCAAGTGGCGTGCTGGTAGTGGGTATTGGACTTGCTACAAAGCTTTTGGGCCTTCTGACGCTTGACCGCAAGGGATATGTGGCCGACATTTCGTTTGGGGCTCGTACCTCAACCGATGATGCAGACGGTCAGGTCGTAGCCACTGCTGCTGTCCCAGAAAATCTGTGCGATGAAGAGTTTGCTCGCGCTGCATGCGCAAAGCTGGTGGGTACGATAGACCAGCTTCCACCTGCAGTTTCTGCAATCTCAGTTGATGGCAAACGTGCCTATCAGCTTGTTCGTGAAGGTAAGACGCCAGAGCTTGCGGCTCGTCGAGTCTCTATTTACGACGCTACTCTTTTGGCGGTGCGCAAACCTTCTACTACGGATGAATCACTGGTATGGACGGTTGCGTTTGACGTTTCAAAAGGGACCTACATTAGAAGTATTGCTCGAGATCTTGGTCAGTCTCTTGGAACAGAGGCTCATATTAGTGGCCTGAGAAGGACGTTCTCTGGTCCCATTACACTTGGGAGCTGCGCTTTATTAGAAGAGCTTGAACAAAGTCCAGCTCAGATGCTTGAAGCTAAACGCCTCAATCCAACTGAGGTTCTGGGATACCCTGTGCATAGGTTGACTGCAGCAGAATACAAGTGTGTTGAGGTTGGAAAACGTTTTGGTATTCCGGAAGATCTCTCTGAGATTGCTCATAACTCGCTGGTCAGCCTTGTGTGGAATGAGACTCTCGTAGGAATTTGGTCAAGGCAGGGTTCCTGTCTAGTCTGCCAGACTAACTTCTCTCAAGGTATTTTGTGTAAGTAA
PROTEIN sequence
Length: 314
VKRGASGINALIAVDKPLGLTSHDVVSRVRRAFGEKRVGHAGTLDPNASGVLVVGIGLATKLLGLLTLDRKGYVADISFGARTSTDDADGQVVATAAVPENLCDEEFARAACAKLVGTIDQLPPAVSAISVDGKRAYQLVREGKTPELAARRVSIYDATLLAVRKPSTTDESLVWTVAFDVSKGTYIRSIARDLGQSLGTEAHISGLRRTFSGPITLGSCALLEELEQSPAQMLEAKRLNPTEVLGYPVHRLTAAEYKCVEVGKRFGIPEDLSEIAHNSLVSLVWNETLVGIWSRQGSCLVCQTNFSQGILCK*