ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

L2_019_244G1_scaffold_111_27

Organism: dasL2_019_244G1_metabat_metabat_1_fa_fa

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 27797..29806

Top 3 Functional Annotations

Value Algorithm Source
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W5B4_HAEP3 similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 669.0
  • Bit_score: 1299
  • Evalue 0.0
fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 669.0
  • Bit_score: 1299
  • Evalue 0.0
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 669.0
  • Bit_score: 1299
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haemophilus parainfluenzae → Haemophilus → Pasteurellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2010
ATGTTCACCATTCAGCACGCAAAAATTCATTTTAACCAAGAGAATACGCCTGTTTCGGATAAATTTGATGATGTGTATTTTTCTAATCAAGATGGTTTAGCGGAAACCCACTATGTGTTTTTAGAAGGTAATCAGTTGTGGGAACATTGGGTTAATTATCAAGAAGCCCACTTTGTTATTGCTGAAACGGGCTTTGGCACAGGATTAAATTTCTTTGCGGCGACTATGCTATTCCGTGAATTTCGCCAGAAATATCCAGATTCGCCTTTAAAACACCTTTATTTTATCTCTTTTGAAAAATACCCTTTGCCACTTGATGTATTACAACAAGCTCATTTAGCCTATCCGCAATTTTCTCATCTTGCTCAGCATTTACAACAGCATTGGCTTAATCCCATTCAAGGTTGCTATCGTTTTCATTTTGATGAAACCACGTTAGATCTTTGGTTTGGTGATGTGGCTGAAAATCTGCCGCAGCTGGGCGATTATATGAATAGTAAAATTGATGCGTGGTTTTTAGATGGTTTTGCACCAAGTAAAAATCCCGATATGTGGAATGAGCAGCTTTATCAGCAAATGTTTCGTTTTACCAAGCTACAAGGCTCCTTTGCAACCTTTACTGCAGCAAGTGCAGTTAGAAAAGGCTTAGAAAATGCAGGCTTTAATATTAAGAAACGCAAAGGCTTCGGTAAAAAACGGGAATGTCTTTCTGGTCAAAAAACGCAGGAAAAACTAACCGCACTTTCTACGCCCTGGTTTCATAGCCAGCAAGCCAATCTAAGCAAGCAAGATATTGCCATTATTGGTGGTGGAATTGCTTCGCTTTGTACAGCCATTTCATTGATTAAACGCGGAGCAAAAATCACAATTTATTGCGAAGATGAGCAAACTGCCCTCAATGCATCTGGCAATAAACAGGGTGCCTTTTATCCGCAACTGAGCGATGATAACGAGCGTAATATTCGTTTTTATATTCATGCCTTTGCCTATGGCCATCAATTTCTACAATGGGCAATTCAACAACAAATCGAATTTGAACATGAGTTCTGTGGTGTCGCGCTTTGTGCTTACAGTGATAAAACAGAAAGTAAATTAAATAAAATCGCTGCACTAAATTTGCCTTCTGATCTATATCAGTCATTAAGTCAAACTGAATTAAGCGAAAAAGTAGGTTTACCGTTACCTTTTGGTGGTGGTTTTATCCCTCAAGGTGCTTGGCTTGCACCACGTCAGTTAGTTCAACACGCTTTTGCCTTTTTAGAAAAACAAGGCGTCCAAATTAAAACATCACATAAAGTAACCGCACTTTCGCAAACAGAACAGGGTTGGCAAATCAAAACTGCTGAAAATGAAACTTTCTGCCATGAAGTGGTTGTTTTAGCAAACGGGCATAAACTCACTGAGTTTGAACAAACACAAAAACTGCCACTCTATCCTGTTCGAGGACAAGTGAGCCAAATTCCAACATCCGCAAATTTGCTTAAACTCAAAACTGTGTTGTGCTATGACGGCTACCTGACCCCAGTCGCTCAAGCGAAAACCAGTCATTGTATTGGCGCAAGTCATGTTCGTGATAATGCGACTCGTGAATTTAGCCTAATTGAACAGCAAGAAAATCAACAAAAGATTCAGCAAAATATCCCTGAAGATTGGACAAAAGAAGTAGATACATCAGGTAATATTGCTCGAATCGGTGTGCGTTGTTCAGTACGTGATCTCACCCCAATGATGGGGGCTGTTCCGCATTTTTCAGCTCAGCAAACACAATATAAAAATTTGTTTAATTTGCGCCGCCGTAAGCAGCCAATAGAACAAGCTGAAAACTACCCTAATCTCTATTTAATCGGTGCATTAGGCTCTCGAGGATTAACCTCTGCACCATTTTTAGGGGAAACACTTGCTTCCTTAATTTATGACGAGCCCTTACCAATGAGTGAAGATCTGATTCATAACTTAATGCCAAACCGCAGTTGGGTCAGACGCTGGTTAAAAGGGGCGGAGGTAAAATAA
PROTEIN sequence
Length: 670
MFTIQHAKIHFNQENTPVSDKFDDVYFSNQDGLAETHYVFLEGNQLWEHWVNYQEAHFVIAETGFGTGLNFFAATMLFREFRQKYPDSPLKHLYFISFEKYPLPLDVLQQAHLAYPQFSHLAQHLQQHWLNPIQGCYRFHFDETTLDLWFGDVAENLPQLGDYMNSKIDAWFLDGFAPSKNPDMWNEQLYQQMFRFTKLQGSFATFTAASAVRKGLENAGFNIKKRKGFGKKRECLSGQKTQEKLTALSTPWFHSQQANLSKQDIAIIGGGIASLCTAISLIKRGAKITIYCEDEQTALNASGNKQGAFYPQLSDDNERNIRFYIHAFAYGHQFLQWAIQQQIEFEHEFCGVALCAYSDKTESKLNKIAALNLPSDLYQSLSQTELSEKVGLPLPFGGGFIPQGAWLAPRQLVQHAFAFLEKQGVQIKTSHKVTALSQTEQGWQIKTAENETFCHEVVVLANGHKLTEFEQTQKLPLYPVRGQVSQIPTSANLLKLKTVLCYDGYLTPVAQAKTSHCIGASHVRDNATREFSLIEQQENQQKIQQNIPEDWTKEVDTSGNIARIGVRCSVRDLTPMMGAVPHFSAQQTQYKNLFNLRRRKQPIEQAENYPNLYLIGALGSRGLTSAPFLGETLASLIYDEPLPMSEDLIHNLMPNRSWVRRWLKGAEVK*